Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm22342-201ENSMUST00000122647 298 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC5.65□□□□□ -1.5
Cdx4Q07424 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm22687-201ENSMUST00000158301 105 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm23777-201ENSMUST00000158994 259 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm9286-201ENSMUST00000173586 508 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm20702-201ENSMUST00000176181 460 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm5445-201ENSMUST00000180224 480 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm28142-201ENSMUST00000186899 698 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm28917-201ENSMUST00000187294 237 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm36994-201ENSMUST00000192941 492 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm19231-201ENSMUST00000193212 830 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdx4Q07424 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdx4Q07424 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm9023-201ENSMUST00000198408 1038 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm43136-201ENSMUST00000200403 636 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm43905-201ENSMUST00000204516 204 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm19174-201ENSMUST00000216944 956 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdx4Q07424 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 AL590616.1-201ENSMUST00000223339 574 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Diaph3-204ENSMUST00000226254 682 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm6166-201ENSMUST00000098689 409 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm42595-201ENSMUST00000196771 1607 ntBASIC5.65□□□□□ -1.51
Cdx4Q07424 Gm45221-201ENSMUST00000207822 2272 ntBASIC5.65□□□□□ -1.51
Cdx4Q07424 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cdx4Q07424 AC165260.6-202ENSMUST00000224959 1958 ntBASIC5.65□□□□□ -1.51
Cdx4Q07424 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Cdx4Q07424 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cdx4Q07424 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Cdx4Q07424 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cdx4Q07424 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cdx4Q07424 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cdx4Q07424 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Cdx4Q07424 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC5.65□□□□□ -1.51
Cdx4Q07424 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Cdx4Q07424 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Cdx4Q07424 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Cdx4Q07424 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Cdx4Q07424 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Cdx4Q07424 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx4Q07424 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx4Q07424 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Cdx4Q07424 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC5.64□□□□□ -1.51
Cdx4Q07424 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx4Q07424 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx4Q07424 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx4Q07424 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx4Q07424 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx4Q07424 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Cdx4Q07424 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Cdx4Q07424 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx4Q07424 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx4Q07424 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Cdx4Q07424 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx4Q07424 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx4Q07424 Gm12919-201ENSMUST00000119855 1594 ntBASIC5.64□□□□□ -1.51
Cdx4Q07424 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.64□□□□□ -1.51
Cdx4Q07424 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Cdx4Q07424 Gm13301-201ENSMUST00000121728 2446 ntBASIC5.64□□□□□ -1.51
Cdx4Q07424 Gm44228-201ENSMUST00000204888 2026 ntBASIC5.64□□□□□ -1.51
Cdx4Q07424 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Cdx4Q07424 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Cdx4Q07424 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx4Q07424 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Cdx4Q07424 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Cdx4Q07424 Gm12584-201ENSMUST00000117109 1105 ntBASIC5.64□□□□□ -1.51
Cdx4Q07424 Gm14975-201ENSMUST00000118741 664 ntBASIC5.64□□□□□ -1.51
Cdx4Q07424 Gm14098-201ENSMUST00000119295 623 ntBASIC5.64□□□□□ -1.51
Cdx4Q07424 Gm15081-201ENSMUST00000119794 844 ntBASIC5.64□□□□□ -1.51
Cdx4Q07424 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.64□□□□□ -1.51
Cdx4Q07424 Gm13495-201ENSMUST00000121156 537 ntBASIC5.64□□□□□ -1.51
Cdx4Q07424 Trav8-2-201ENSMUST00000130122 337 ntBASIC5.64□□□□□ -1.51
Cdx4Q07424 Gm14368-201ENSMUST00000145305 415 ntBASIC5.64□□□□□ -1.51
Cdx4Q07424 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx4Q07424 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdx4Q07424 Gm23639-201ENSMUST00000175078 132 ntBASIC5.64□□□□□ -1.51
Cdx4Q07424 Gm24369-201ENSMUST00000175387 96 ntBASIC5.64□□□□□ -1.51
Cdx4Q07424 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.64□□□□□ -1.51
Cdx4Q07424 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms