Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 CT009550.5-201ENSMUST00000226286 382 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm10704-201ENSMUST00000098952 730 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 AC158605.4-201ENSMUST00000219013 3361 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm42519-201ENSMUST00000199282 3656 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 AC153152.1-201ENSMUST00000221105 2742 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Mei1-203ENSMUST00000188048 3197 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm42866-201ENSMUST00000195919 3304 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Prg4-202ENSMUST00000111901 3495 ntTSL 5 BASIC6.46□□□□□ -1.37
Col8a1Q00780 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Col8a1Q00780 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Col8a1Q00780 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col8a1Q00780 Aldoart1-202ENSMUST00000179234 2050 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
Col8a1Q00780 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col8a1Q00780 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col8a1Q00780 AC154806.2-201ENSMUST00000227212 2385 ntBASIC6.46□□□□□ -1.37
Col8a1Q00780 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col8a1Q00780 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Col8a1Q00780 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.46□□□□□ -1.37
Col8a1Q00780 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col8a1Q00780 Gem-201ENSMUST00000029868 1994 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
Col8a1Q00780 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col8a1Q00780 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col8a1Q00780 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col8a1Q00780 Mas1-201ENSMUST00000089015 2401 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col8a1Q00780 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm26144-201ENSMUST00000104475 132 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col8a1Q00780 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm12401-201ENSMUST00000118435 228 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm13118-201ENSMUST00000120402 549 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm11370-201ENSMUST00000120583 260 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm15379-201ENSMUST00000121224 648 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm11350-201ENSMUST00000121436 870 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.46□□□□□ -1.38
Col8a1Q00780 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col8a1Q00780 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC6.46□□□□□ -1.38
Col8a1Q00780 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col8a1Q00780 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Col8a1Q00780 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm22698-201ENSMUST00000175375 108 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm28885-201ENSMUST00000185615 563 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm8498-201ENSMUST00000188227 974 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm29201-201ENSMUST00000189120 431 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm37000-201ENSMUST00000193058 428 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm37225-201ENSMUST00000193423 325 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm37426-201ENSMUST00000195241 2470 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm42708-201ENSMUST00000196332 905 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm44356-201ENSMUST00000196731 111 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm43044-201ENSMUST00000198091 379 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC6.46□□□□□ -1.38
Col8a1Q00780 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col8a1Q00780 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col8a1Q00780 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC6.46□□□□□ -1.38
Col8a1Q00780 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col8a1Q00780 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col8a1Q00780 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Col8a1Q00780 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Col8a1Q00780 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Col8a1Q00780 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
Col8a1Q00780 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col8a1Q00780 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col8a1Q00780 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC6.46□□□□□ -1.38
Col8a1Q00780 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col8a1Q00780 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col8a1Q00780 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.46□□□□□ -1.38
Col8a1Q00780 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col8a1Q00780 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC6.46□□□□□ -1.38
Col8a1Q00780 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms