Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Nkx3-2P97503 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm11877-201ENSMUST00000118921 852 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm6654-201ENSMUST00000118950 348 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm11517-201ENSMUST00000119491 387 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm11278-201ENSMUST00000121002 997 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm23187-201ENSMUST00000175746 86 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm27373-201ENSMUST00000184017 184 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm29072-201ENSMUST00000191149 678 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm36932-201ENSMUST00000195226 929 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm42926-201ENSMUST00000200496 697 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm43992-201ENSMUST00000204358 197 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm44865-201ENSMUST00000207240 531 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm45478-201ENSMUST00000209472 211 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 AC117949.1-201ENSMUST00000225547 419 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Mir365-2-201ENSMUST00000083555 112 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Mir455-201ENSMUST00000093594 82 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm6166-201ENSMUST00000098689 409 ntBASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Nkx3-2P97503 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nkx3-2P97503 Gm45221-201ENSMUST00000207822 2272 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Nkx3-2P97503 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nkx3-2P97503 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nkx3-2P97503 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
Nkx3-2P97503 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Nkx3-2P97503 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Nkx3-2P97503 Gm37364-201ENSMUST00000192533 3920 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Nkx3-2P97503 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC6.94□□□□□ -1.3
Nkx3-2P97503 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nkx3-2P97503 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Nkx3-2P97503 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Nkx3-2P97503 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 Gm16221-201ENSMUST00000117331 393 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 Gm15209-201ENSMUST00000117703 400 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 Gm12465-201ENSMUST00000118591 300 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 Gm11416-201ENSMUST00000119111 863 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 Gm24139-201ENSMUST00000122780 288 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Nkx3-2P97503 Gm22818-201ENSMUST00000157446 104 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 Gm22817-201ENSMUST00000157448 356 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 Gm24685-201ENSMUST00000157764 285 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC6.94□□□□□ -1.3
Nkx3-2P97503 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC6.94□□□□□ -1.3
Nkx3-2P97503 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
Nkx3-2P97503 Gm8046-201ENSMUST00000172151 616 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.94□□□□□ -1.3
Nkx3-2P97503 Gm24824-201ENSMUST00000175097 78 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 Gm22702-201ENSMUST00000175372 69 ntBASIC6.94□□□□□ -1.3
Nkx3-2P97503 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms