Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC8.06□□□□□ -1.12
Hmgb1P63158 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb1P63158 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC8.06□□□□□ -1.12
Hmgb1P63158 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb1P63158 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC8.06□□□□□ -1.12
Hmgb1P63158 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb1P63158 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC8.06□□□□□ -1.12
Hmgb1P63158 Gm18193-201ENSMUST00000210017 772 ntBASIC8.06□□□□□ -1.12
Hmgb1P63158 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb1P63158 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC8.06□□□□□ -1.12
Hmgb1P63158 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC8.06□□□□□ -1.12
Hmgb1P63158 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.06□□□□□ -1.12
Hmgb1P63158 AC118230.1-201ENSMUST00000220196 656 ntBASIC8.06□□□□□ -1.12
Hmgb1P63158 AC140208.1-201ENSMUST00000226609 285 ntBASIC8.06□□□□□ -1.12
Hmgb1P63158 AC137950.1-201ENSMUST00000228553 515 ntBASIC8.06□□□□□ -1.12
Hmgb1P63158 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Hmgb1P63158 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC8.06□□□□□ -1.12
Hmgb1P63158 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb1P63158 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb1P63158 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb1P63158 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb1P63158 AC174797.5-201ENSMUST00000225055 1860 ntBASIC8.06□□□□□ -1.12
Hmgb1P63158 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb1P63158 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.06□□□□□ -1.12
Hmgb1P63158 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Hmgb1P63158 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Hmgb1P63158 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Hmgb1P63158 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb1P63158 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb1P63158 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb1P63158 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb1P63158 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb1P63158 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb1P63158 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm14630-201ENSMUST00000118057 246 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm3931-201ENSMUST00000119038 455 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm13282-201ENSMUST00000121577 545 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC8.05□□□□□ -1.12
Hmgb1P63158 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm26371-201ENSMUST00000157829 104 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm16027-201ENSMUST00000161618 758 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm27044-201ENSMUST00000183033 796 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm28728-201ENSMUST00000189087 405 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm37392-201ENSMUST00000192098 516 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC8.05□□□□□ -1.12
Hmgb1P63158 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm42472-201ENSMUST00000201626 859 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm30708-201ENSMUST00000202183 312 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm18562-201ENSMUST00000209949 915 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm45506-201ENSMUST00000211620 280 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC8.05□□□□□ -1.12
Hmgb1P63158 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm18363-201ENSMUST00000221671 730 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm18619-201ENSMUST00000222722 1147 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 AC126939.4-201ENSMUST00000225360 743 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 AC110176.1-201ENSMUST00000226219 504 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Hmgb1P63158 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm42968-201ENSMUST00000198578 1372 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb1P63158 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm45457-201ENSMUST00000209931 3089 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm20706-201ENSMUST00000175985 2023 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Hmgb1P63158 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.05□□□□□ -1.12
Hmgb1P63158 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Hmgb1P63158 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Hmgb1P63158 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb1P63158 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm13768-201ENSMUST00000116469 929 ntBASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm12817-201ENSMUST00000119622 610 ntBASIC8.04□□□□□ -1.12
Hmgb1P63158 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm25455-201ENSMUST00000157946 325 ntBASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm22670-201ENSMUST00000158724 143 ntBASIC8.04□□□□□ -1.12
Hmgb1P63158 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmgb1P63158 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC8.04□□□□□ -1.12
Hmgb1P63158 Gm29175-201ENSMUST00000189500 402 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms