Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm6P62313 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm6P62313 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Lsm6P62313 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm6P62313 Malat1-201ENSMUST00000172812 6983 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Lsm6P62313 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm6P62313 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Lsm6P62313 Gm10388-201ENSMUST00000205001 2936 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Lsm6P62313 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm6P62313 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Lsm6P62313 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm6P62313 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm6P62313 Gm13798-201ENSMUST00000118285 139 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Gm13463-201ENSMUST00000119020 233 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Gm16248-201ENSMUST00000124238 243 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.1□□□□□ -1.43
Lsm6P62313 Gm16284-201ENSMUST00000140995 400 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Gm25180-201ENSMUST00000157746 115 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm6P62313 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm6P62313 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Lsm6P62313 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Gm26570-201ENSMUST00000180672 342 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Gm8245-201ENSMUST00000182434 987 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.1□□□□□ -1.43
Lsm6P62313 Mir7029-201ENSMUST00000184777 61 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC6.1□□□□□ -1.43
Lsm6P62313 Gm9710-201ENSMUST00000198053 499 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Gm8539-201ENSMUST00000199822 501 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Lsm6P62313 Gm44565-201ENSMUST00000208194 269 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC6.1□□□□□ -1.43
Lsm6P62313 Gm10126-201ENSMUST00000221732 168 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.1□□□□□ -1.43
Lsm6P62313 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm6P62313 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm6P62313 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm6P62313 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Lsm6P62313 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm6P62313 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
Lsm6P62313 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm6P62313 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Lsm6P62313 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm6P62313 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lsm6P62313 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm6P62313 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm6P62313 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm6P62313 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Lsm6P62313 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Lsm6P62313 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm6P62313 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Lsm6P62313 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm6P62313 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.09□□□□□ -1.43
Lsm6P62313 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm6P62313 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Lsm6P62313 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm6P62313 Gm25083-201ENSMUST00000102319 92 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm6P62313 Gm8624-201ENSMUST00000118083 432 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm6P62313 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Gm12181-201ENSMUST00000121448 531 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC6.09□□□□□ -1.43
Lsm6P62313 Gm26179-201ENSMUST00000177723 132 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Gm5300-201ENSMUST00000182201 1003 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm6P62313 Gm28958-201ENSMUST00000185864 703 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm6P62313 Gm4785-201ENSMUST00000191025 751 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Gm42938-201ENSMUST00000198414 1072 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Gm42696-201ENSMUST00000199859 1142 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm6P62313 Gm4605-201ENSMUST00000203148 625 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.09□□□□□ -1.43
Lsm6P62313 Gm44979-201ENSMUST00000206218 287 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC6.09□□□□□ -1.43
Lsm6P62313 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC6.09□□□□□ -1.43
Lsm6P62313 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.09□□□□□ -1.43
Lsm6P62313 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC6.09□□□□□ -1.43
Lsm6P62313 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 A1cf-203ENSMUST00000224400 1204 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 AC157212.1-201ENSMUST00000228398 1075 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm6P62313 Gm7731-201ENSMUST00000091759 470 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Lsm6P62313 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Lsm6P62313 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.09□□□□□ -1.43
Lsm6P62313 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lsm6P62313 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Lsm6P62313 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms