Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdh11P55288 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdh11P55288 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cdh11P55288 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdh11P55288 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Cdh11P55288 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cdh11P55288 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC6.34□□□□□ -1.39
Cdh11P55288 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdh11P55288 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdh11P55288 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdh11P55288 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdh11P55288 Gm18726-201ENSMUST00000218175 2010 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Cdh11P55288 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdh11P55288 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdh11P55288 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdh11P55288 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cdh11P55288 Gm15739-201ENSMUST00000118049 872 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Gm12477-201ENSMUST00000121221 571 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Gm5809-201ENSMUST00000121854 529 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Gm22275-201ENSMUST00000122470 310 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC6.34□□□□□ -1.39
Cdh11P55288 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdh11P55288 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC6.34□□□□□ -1.39
Cdh11P55288 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.34□□□□□ -1.39
Cdh11P55288 Gm22795-201ENSMUST00000157233 118 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Gm8715-201ENSMUST00000162728 531 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Gm7420-201ENSMUST00000162836 842 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Gm28952-201ENSMUST00000189285 681 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Gm38337-201ENSMUST00000193986 599 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC6.34□□□□□ -1.39
Cdh11P55288 Gm10416-201ENSMUST00000197379 645 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Gm44192-201ENSMUST00000204195 556 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Gm44760-201ENSMUST00000206375 1173 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Gm45042-201ENSMUST00000207377 211 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6.34□□□□□ -1.39
Cdh11P55288 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.34□□□□□ -1.39
Cdh11P55288 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC6.34□□□□□ -1.39
Cdh11P55288 Gm2398-201ENSMUST00000218347 883 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Cdh11P55288 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Cdh11P55288 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cdh11P55288 Gm37382-201ENSMUST00000193032 1596 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cdh11P55288 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.34□□□□□ -1.39
Cdh11P55288 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cdh11P55288 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.34□□□□□ -1.39
Cdh11P55288 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cdh11P55288 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.34□□□□□ -1.39
Cdh11P55288 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.34□□□□□ -1.4
Cdh11P55288 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Cdh11P55288 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Cdh11P55288 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.34□□□□□ -1.4
Cdh11P55288 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
Cdh11P55288 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.4
Cdh11P55288 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdh11P55288 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdh11P55288 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cdh11P55288 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.33□□□□□ -1.4
Cdh11P55288 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.33□□□□□ -1.4
Cdh11P55288 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Cdh11P55288 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdh11P55288 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cdh11P55288 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdh11P55288 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdh11P55288 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdh11P55288 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdh11P55288 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.33□□□□□ -1.4
Cdh11P55288 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdh11P55288 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.33□□□□□ -1.4
Cdh11P55288 Gm13545-201ENSMUST00000119044 482 ntBASIC6.33□□□□□ -1.4
Cdh11P55288 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Cdh11P55288 Gm15842-201ENSMUST00000120513 618 ntBASIC6.33□□□□□ -1.4
Cdh11P55288 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.33□□□□□ -1.4
Cdh11P55288 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC6.33□□□□□ -1.4
Cdh11P55288 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdh11P55288 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Cdh11P55288 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Cdh11P55288 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
Cdh11P55288 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
Cdh11P55288 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.33□□□□□ -1.4
Cdh11P55288 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
Cdh11P55288 Gm27001-201ENSMUST00000182252 936 ntBASIC6.33□□□□□ -1.4
Cdh11P55288 Pea15b-201ENSMUST00000182806 387 ntBASIC6.33□□□□□ -1.4
Cdh11P55288 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.33□□□□□ -1.4
Cdh11P55288 Gm29357-201ENSMUST00000186877 698 ntBASIC6.33□□□□□ -1.4
Cdh11P55288 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdh11P55288 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdh11P55288 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.33□□□□□ -1.4
Cdh11P55288 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdh11P55288 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.33□□□□□ -1.4
Cdh11P55288 Gm6681-201ENSMUST00000205215 607 ntBASIC6.33□□□□□ -1.4
Cdh11P55288 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.33□□□□□ -1.4
Cdh11P55288 Gm44566-201ENSMUST00000207638 304 ntBASIC6.33□□□□□ -1.4
Cdh11P55288 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 162.9 ms