Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC10.56□□□□□ -0.72
Cux1P53564 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC10.56□□□□□ -0.72
Cux1P53564 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC10.56□□□□□ -0.72
Cux1P53564 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC10.56□□□□□ -0.72
Cux1P53564 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 C78859-201ENSMUST00000212800 5943 ntBASIC10.55□□□□□ -0.72
Cux1P53564 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Cux1P53564 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cux1P53564 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Cux1P53564 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cux1P53564 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC10.55□□□□□ -0.72
Cux1P53564 Gm24434-201ENSMUST00000104081 132 ntBASIC10.55□□□□□ -0.72
Cux1P53564 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC10.55□□□□□ -0.72
Cux1P53564 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC10.55□□□□□ -0.72
Cux1P53564 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 Gm9064-201ENSMUST00000163579 566 ntBASIC10.55□□□□□ -0.72
Cux1P53564 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC10.55□□□□□ -0.72
Cux1P53564 Gm22701-201ENSMUST00000175371 291 ntBASIC10.55□□□□□ -0.72
Cux1P53564 Gm23450-201ENSMUST00000178285 91 ntBASIC10.55□□□□□ -0.72
Cux1P53564 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cux1P53564 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Cux1P53564 Gm27972-201ENSMUST00000184720 137 ntBASIC10.55□□□□□ -0.72
Cux1P53564 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC10.55□□□□□ -0.72
Cux1P53564 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC10.55□□□□□ -0.72
Cux1P53564 Gm44705-201ENSMUST00000206719 339 ntBASIC10.55□□□□□ -0.72
Cux1P53564 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC10.55□□□□□ -0.72
Cux1P53564 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC10.55□□□□□ -0.72
Cux1P53564 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cux1P53564 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cux1P53564 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Cux1P53564 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cux1P53564 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Cux1P53564 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Cux1P53564 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cux1P53564 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cux1P53564 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cux1P53564 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cux1P53564 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Cux1P53564 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Cux1P53564 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Cux1P53564 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cux1P53564 Gm14614-201ENSMUST00000119873 384 ntBASIC10.54□□□□□ -0.72
Cux1P53564 Gm14925-201ENSMUST00000120611 438 ntBASIC10.54□□□□□ -0.72
Cux1P53564 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cux1P53564 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC10.54□□□□□ -0.72
Cux1P53564 Gm27653-201ENSMUST00000185037 136 ntBASIC10.54□□□□□ -0.72
Cux1P53564 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cux1P53564 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC10.54□□□□□ -0.72
Cux1P53564 Gm44861-201ENSMUST00000208325 1220 ntBASIC10.54□□□□□ -0.72
Cux1P53564 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC10.54□□□□□ -0.72
Cux1P53564 AC165292.1-201ENSMUST00000215218 620 ntBASIC10.54□□□□□ -0.72
Cux1P53564 AC102139.1-201ENSMUST00000227000 251 ntBASIC10.54□□□□□ -0.72
Cux1P53564 AC113031.1-201ENSMUST00000227400 432 ntBASIC10.54□□□□□ -0.72
Cux1P53564 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cux1P53564 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cux1P53564 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC10.54□□□□□ -0.72
Cux1P53564 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cux1P53564 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC10.54□□□□□ -0.72
Cux1P53564 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cux1P53564 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Cux1P53564 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC10.54□□□□□ -0.72
Cux1P53564 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cux1P53564 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cux1P53564 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cux1P53564 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cux1P53564 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC10.53□□□□□ -0.72
Cux1P53564 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Cux1P53564 Gm15300-201ENSMUST00000122324 279 ntBASIC10.53□□□□□ -0.72
Cux1P53564 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC10.53□□□□□ -0.72
Cux1P53564 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Cux1P53564 Gm9027-201ENSMUST00000165914 661 ntBASIC10.53□□□□□ -0.72
Cux1P53564 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC10.53□□□□□ -0.72
Cux1P53564 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Cux1P53564 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC10.53□□□□□ -0.72
Cux1P53564 AC154795.1-201ENSMUST00000225611 364 ntBASIC10.53□□□□□ -0.72
Cux1P53564 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cux1P53564 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms