Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Tnfsf4P43488 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Mir708-201ENSMUST00000102189 109 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm22707-201ENSMUST00000103834 110 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm15538-201ENSMUST00000121410 313 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm17047-201ENSMUST00000167709 430 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Tnfsf4P43488 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Tnfsf4P43488 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm7481-201ENSMUST00000182020 995 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm8245-201ENSMUST00000182434 987 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm9167-201ENSMUST00000182469 962 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm28573-201ENSMUST00000187821 380 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm28145-201ENSMUST00000189742 380 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm28400-201ENSMUST00000191332 380 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm9497-201ENSMUST00000199908 538 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm36448-201ENSMUST00000199916 438 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm44213-201ENSMUST00000204977 703 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm44931-201ENSMUST00000206056 545 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm44705-201ENSMUST00000206719 339 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm4270-201ENSMUST00000209666 406 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm18860-201ENSMUST00000212029 764 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Gm17199-201ENSMUST00000097296 416 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Tnfsf4P43488 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC6.58□□□□□ -1.36
Tnfsf4P43488 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Tnfsf4P43488 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 AC093022.3-201ENSMUST00000226569 1926 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm25498-201ENSMUST00000104424 129 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm11972-201ENSMUST00000118514 389 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm14869-201ENSMUST00000119007 884 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm12331-201ENSMUST00000119927 622 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 BC064078-201ENSMUST00000122939 570 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm20430-201ENSMUST00000172474 207 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm24923-201ENSMUST00000178201 88 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Mir8120-201ENSMUST00000185035 139 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm29197-201ENSMUST00000185922 702 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm30517-201ENSMUST00000197350 772 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm20274-201ENSMUST00000206967 584 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Tnfsf4P43488 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Tnfsf4P43488 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.57□□□□□ -1.36
Tnfsf4P43488 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Tnfsf4P43488 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms