Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm18503-201ENSMUST00000220340 728 ntBASIC6.5□□□□□ -1.37
Sox6P40645 CT030260.1-201ENSMUST00000223243 442 ntBASIC6.5□□□□□ -1.37
Sox6P40645 AC161877.2-201ENSMUST00000226248 545 ntBASIC6.5□□□□□ -1.37
Sox6P40645 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Sox6P40645 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Sox6P40645 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox6P40645 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox6P40645 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox6P40645 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox6P40645 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.5□□□□□ -1.37
Sox6P40645 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Sox6P40645 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.5□□□□□ -1.37
Sox6P40645 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox6P40645 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Sox6P40645 Gm37067-201ENSMUST00000195730 1628 ntBASIC6.5□□□□□ -1.37
Sox6P40645 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox6P40645 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Sox6P40645 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sox6P40645 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
Sox6P40645 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Gm44704-201ENSMUST00000208963 1990 ntBASIC6.49□□□□□ -1.37
Sox6P40645 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.49□□□□□ -1.37
Sox6P40645 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC6.49□□□□□ -1.37
Sox6P40645 Gm16418-201ENSMUST00000118577 171 ntBASIC6.49□□□□□ -1.37
Sox6P40645 Gm14787-201ENSMUST00000121236 388 ntBASIC6.49□□□□□ -1.37
Sox6P40645 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC6.49□□□□□ -1.37
Sox6P40645 Gm10913-201ENSMUST00000133732 463 ntBASIC6.49□□□□□ -1.37
Sox6P40645 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Gm22035-201ENSMUST00000157284 228 ntBASIC6.49□□□□□ -1.37
Sox6P40645 Gm23276-201ENSMUST00000157913 138 ntBASIC6.49□□□□□ -1.37
Sox6P40645 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC6.49□□□□□ -1.37
Sox6P40645 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.49□□□□□ -1.37
Sox6P40645 Gm23639-201ENSMUST00000175078 132 ntBASIC6.49□□□□□ -1.37
Sox6P40645 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.49□□□□□ -1.37
Sox6P40645 Mir7011-201ENSMUST00000183768 73 ntBASIC6.49□□□□□ -1.37
Sox6P40645 Gm29357-201ENSMUST00000186877 698 ntBASIC6.49□□□□□ -1.37
Sox6P40645 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 Gm42734-201ENSMUST00000201656 878 ntBASIC6.49□□□□□ -1.37
Sox6P40645 Gm44044-201ENSMUST00000205178 1089 ntBASIC6.49□□□□□ -1.37
Sox6P40645 Gm44931-201ENSMUST00000206056 545 ntBASIC6.49□□□□□ -1.37
Sox6P40645 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC6.49□□□□□ -1.37
Sox6P40645 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sox6P40645 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC6.49□□□□□ -1.37
Sox6P40645 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sox6P40645 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.49□□□□□ -1.37
Sox6P40645 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Sox6P40645 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox6P40645 Gm37163-201ENSMUST00000195439 1690 ntBASIC6.49□□□□□ -1.37
Sox6P40645 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox6P40645 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Sox6P40645 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Sox6P40645 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox6P40645 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox6P40645 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sox6P40645 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.48□□□□□ -1.37
Sox6P40645 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox6P40645 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Sox6P40645 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sox6P40645 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox6P40645 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox6P40645 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.48□□□□□ -1.37
Sox6P40645 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sox6P40645 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox6P40645 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms