Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm28125-201ENSMUST00000188470 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29391-201ENSMUST00000188545 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29280-201ENSMUST00000188571 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28349-201ENSMUST00000188590 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29652-201ENSMUST00000188622 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28819-206ENSMUST00000188816 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29079-201ENSMUST00000188875 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28213-201ENSMUST00000189183 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29382-201ENSMUST00000189549 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29377-205ENSMUST00000189603 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28327-201ENSMUST00000189638 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28790-201ENSMUST00000189642 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28907-201ENSMUST00000189700 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29586-207ENSMUST00000189745 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29115-201ENSMUST00000189870 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28366-201ENSMUST00000190147 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29212-201ENSMUST00000190384 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29533-201ENSMUST00000190403 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28162-201ENSMUST00000190545 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29030-201ENSMUST00000190848 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28742-201ENSMUST00000191001 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28899-201ENSMUST00000191161 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29567-201ENSMUST00000191188 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28222-201ENSMUST00000191210 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28776-201ENSMUST00000191282 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29306-201ENSMUST00000191366 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29618-201ENSMUST00000191423 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28136-210ENSMUST00000191432 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29251-201ENSMUST00000191480 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28658-201ENSMUST00000191532 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm32180-201ENSMUST00000192415 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm30598-201ENSMUST00000192620 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Traf1P39428 Gm37627-201ENSMUST00000194585 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm34274-201ENSMUST00000195825 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm25617-202ENSMUST00000198387 132 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm45782-201ENSMUST00000212670 366 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.17□□□□□ -1.1
Traf1P39428 Gm19047-201ENSMUST00000220922 1099 ntBASIC8.17□□□□□ -1.1
Traf1P39428 AC154324.1-201ENSMUST00000226711 814 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Traf1P39428 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Traf1P39428 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Traf1P39428 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Traf1P39428 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC8.17□□□□□ -1.1
Traf1P39428 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC8.17□□□□□ -1.1
Traf1P39428 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC8.17□□□□□ -1.1
Traf1P39428 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC8.17□□□□□ -1.1
Traf1P39428 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC8.17□□□□□ -1.1
Traf1P39428 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC8.17□□□□□ -1.1
Traf1P39428 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Traf1P39428 Gm45084-201ENSMUST00000207096 1957 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Traf1P39428 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Traf1P39428 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Traf1P39428 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Traf1P39428 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Traf1P39428 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Traf1P39428 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Traf1P39428 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC8.16□□□□□ -1.1
Traf1P39428 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Traf1P39428 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Traf1P39428 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Traf1P39428 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Traf1P39428 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.16□□□□□ -1.1
Traf1P39428 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.16□□□□□ -1.1
Traf1P39428 Gm11889-201ENSMUST00000118402 1079 ntBASIC8.16□□□□□ -1.1
Traf1P39428 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Traf1P39428 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Traf1P39428 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Traf1P39428 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Traf1P39428 Gm26607-201ENSMUST00000180661 867 ntBASIC8.16□□□□□ -1.1
Traf1P39428 Gm27156-201ENSMUST00000184589 754 ntBASIC8.16□□□□□ -1.1
Traf1P39428 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Traf1P39428 Gm37669-201ENSMUST00000192184 820 ntBASIC8.16□□□□□ -1.1
Traf1P39428 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.16□□□□□ -1.1
Traf1P39428 Gm37364-201ENSMUST00000192533 3920 ntBASIC8.16□□□□□ -1.1
Traf1P39428 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC8.16□□□□□ -1.1
Traf1P39428 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Traf1P39428 Gm43546-201ENSMUST00000196721 943 ntBASIC8.16□□□□□ -1.1
Traf1P39428 Gm44471-201ENSMUST00000197963 100 ntBASIC8.16□□□□□ -1.1
Traf1P39428 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Traf1P39428 Gm3511-201ENSMUST00000199823 204 ntBASIC8.16□□□□□ -1.1
Traf1P39428 Gm42713-201ENSMUST00000202709 945 ntBASIC8.16□□□□□ -1.1
Traf1P39428 Gm45136-201ENSMUST00000205793 943 ntBASIC8.16□□□□□ -1.1
Traf1P39428 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Traf1P39428 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC8.16□□□□□ -1.1
Traf1P39428 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC8.16□□□□□ -1.1
Traf1P39428 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Traf1P39428 Gm19238-201ENSMUST00000221936 1260 ntBASIC8.16□□□□□ -1.1
Traf1P39428 AC161374.1-201ENSMUST00000224191 794 ntBASIC8.16□□□□□ -1.1
Traf1P39428 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC8.16□□□□□ -1.1
Traf1P39428 CT573019.1-201ENSMUST00000227762 1689 ntBASIC8.16□□□□□ -1.1
Traf1P39428 AC122459.3-201ENSMUST00000228508 1042 ntBASIC8.16□□□□□ -1.1
Traf1P39428 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Traf1P39428 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Traf1P39428 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Traf1P39428 Gm10108-201ENSMUST00000078246 319 ntBASIC8.16□□□□□ -1.1
Traf1P39428 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Traf1P39428 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms