Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hoxd3P09027 Tigar-201ENSMUST00000039913 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hoxd3P09027 Ece2-207ENSMUST00000079600 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hoxd3P09027 Thsd1-203ENSMUST00000162447 3273 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hoxd3P09027 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hoxd3P09027 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Hoxd3P09027 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Hoxd3P09027 Tbx19-201ENSMUST00000027859 2660 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hoxd3P09027 Ubqln3-201ENSMUST00000057254 2376 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm28187-201ENSMUST00000186885 2134 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm8428-201ENSMUST00000159919 1784 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Lpin3-202ENSMUST00000109455 3365 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm43413-201ENSMUST00000200411 1566 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Sp1-202ENSMUST00000163709 3134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Slco4a1-201ENSMUST00000038225 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm15283-201ENSMUST00000125308 1451 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Itgb2l-202ENSMUST00000113773 2806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Fancl-201ENSMUST00000004120 2724 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 1810053B23Rik-204ENSMUST00000185971 1309 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Anapc15-205ENSMUST00000106978 841 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm16400-201ENSMUST00000116523 1029 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm23840-201ENSMUST00000116950 97 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm15516-201ENSMUST00000117292 193 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm12641-201ENSMUST00000117874 985 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm12102-201ENSMUST00000118251 604 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm15571-201ENSMUST00000119887 637 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm13121-201ENSMUST00000120637 632 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm13471-201ENSMUST00000122057 433 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC6.62□□□□□ -1.35
Hoxd3P09027 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Rasgef1b-207ENSMUST00000166484 1296 ntTSL 5 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm20319-201ENSMUST00000172522 771 ntTSL 2 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm20648-201ENSMUST00000175815 328 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm25190-201ENSMUST00000176664 95 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm37539-201ENSMUST00000192644 235 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Mark4-ps-201ENSMUST00000196140 384 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm17824-201ENSMUST00000197690 805 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm43897-201ENSMUST00000204019 309 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm7624-201ENSMUST00000209702 435 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm5023-201ENSMUST00000217442 587 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 AC132121.1-201ENSMUST00000220774 332 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm9305-201ENSMUST00000220962 599 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm46342-201ENSMUST00000223411 602 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC6.62□□□□□ -1.35
Hoxd3P09027 CT030135.1-201ENSMUST00000223760 570 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 CT009733.1-201ENSMUST00000225322 425 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Olfr214-201ENSMUST00000060204 1008 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Hoxd3P09027 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Hnrnpc-209ENSMUST00000228198 2498 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 Bgn-201ENSMUST00000033741 2419 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Srbd1-201ENSMUST00000095187 3530 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Gm9246-201ENSMUST00000117587 3490 ntBASIC6.62□□□□□ -1.35
Hoxd3P09027 AC160562.1-201ENSMUST00000216170 3468 ntTSL 5 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Ceacam19-201ENSMUST00000052605 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Rbm26-204ENSMUST00000163545 3270 ntTSL 5 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Fam110b-202ENSMUST00000108380 3119 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Ank3-219ENSMUST00000182437 3113 ntTSL 5 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Hoxd3P09027 A430033K04Rik-202ENSMUST00000069862 3038 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Hoxd3P09027 Ugt2b36-201ENSMUST00000094649 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Rad51b-201ENSMUST00000079533 1759 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Prkaa2-201ENSMUST00000030243 7969 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hoxd3P09027 Bcl6b-201ENSMUST00000000326 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hoxd3P09027 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Ano7-202ENSMUST00000186641 3984 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Hoxd3P09027 Acsl6-206ENSMUST00000101211 3106 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms