Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Tbc1d24-203ENSMUST00000097376 7265 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Gm24434-201ENSMUST00000104081 132 ntBASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Gm15621-201ENSMUST00000119162 364 ntBASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Gm12754-201ENSMUST00000121908 454 ntBASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Gm15300-201ENSMUST00000122324 279 ntBASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Gm5970-201ENSMUST00000131638 1216 ntBASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Gm23799-201ENSMUST00000175559 120 ntBASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Gm3351-201ENSMUST00000193454 505 ntBASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Gm38840-201ENSMUST00000204716 843 ntBASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 AV026068-216ENSMUST00000223874 328 ntBASIC7.09□□□□□ -1.27
Col4a6B1AVK5 AV026068-218ENSMUST00000223980 575 ntBASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Gm5514-201ENSMUST00000060477 306 ntBASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
Col4a6B1AVK5 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Col4a6B1AVK5 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Col4a6B1AVK5 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Col4a6B1AVK5 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Col4a6B1AVK5 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Gm37663-201ENSMUST00000191887 2299 ntBASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Gm26346-201ENSMUST00000157525 329 ntBASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Gm18447-201ENSMUST00000187501 307 ntBASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Gm43382-201ENSMUST00000198954 838 ntBASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Gm5418-201ENSMUST00000206932 528 ntBASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Gm17950-201ENSMUST00000214617 646 ntBASIC7.08□□□□□ -1.28
Col4a6B1AVK5 A1cf-203ENSMUST00000224400 1204 ntBASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Tbx22-203ENSMUST00000168174 5217 ntAPPRIS P4 TSL 2 BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Gm42679-201ENSMUST00000197086 2906 ntBASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col4a6B1AVK5 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm7212-201ENSMUST00000120817 348 ntBASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm9428-201ENSMUST00000127214 769 ntBASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC7.07□□□□□ -1.28
Col4a6B1AVK5 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms