Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Col6a4A2AX52 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a4A2AX52 Gm24709-201ENSMUST00000104123 132 ntBASIC5.87□□□□□ -1.47
Col6a4A2AX52 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gm23776-201ENSMUST00000158993 325 ntBASIC5.87□□□□□ -1.47
Col6a4A2AX52 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gm37072-201ENSMUST00000194570 837 ntBASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gm44221-201ENSMUST00000203552 388 ntBASIC5.87□□□□□ -1.47
Col6a4A2AX52 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gm15681-201ENSMUST00000137501 2704 ntBASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gm35172-201ENSMUST00000196037 2649 ntBASIC5.87□□□□□ -1.47
Col6a4A2AX52 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gm44007-201ENSMUST00000203845 2189 ntBASIC5.87□□□□□ -1.47
Col6a4A2AX52 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gm43128-201ENSMUST00000202212 1621 ntBASIC5.87□□□□□ -1.47
Col6a4A2AX52 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a4A2AX52 AC168056.4-201ENSMUST00000223835 2567 ntBASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gm23979-201ENSMUST00000104071 128 ntBASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gm4342-201ENSMUST00000118982 367 ntBASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gm12844-201ENSMUST00000119463 582 ntBASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gm15750-201ENSMUST00000120970 616 ntBASIC5.87□□□□□ -1.47
Col6a4A2AX52 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a4A2AX52 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm45516-201ENSMUST00000211588 4182 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm37633-201ENSMUST00000192858 2700 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm11462-201ENSMUST00000117749 562 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm5752-201ENSMUST00000117771 594 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm14580-201ENSMUST00000119122 718 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm2986-201ENSMUST00000121603 382 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm7152-201ENSMUST00000163570 605 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Mir7211-201ENSMUST00000184071 63 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 AL929555.1-201ENSMUST00000215283 509 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm6990-201ENSMUST00000086830 348 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm44661-201ENSMUST00000208830 3503 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm17841-201ENSMUST00000210711 2425 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm18194-202ENSMUST00000210952 3442 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm23810-201ENSMUST00000175150 74 ntBASIC5.86□□□□□ -1.47
Col6a4A2AX52 Gm26729-201ENSMUST00000180744 352 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms