Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm8421-201ENSMUST00000119439 305 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm9439-201ENSMUST00000119554 973 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm6142-201ENSMUST00000120290 325 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm12477-201ENSMUST00000121221 571 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm14251-201ENSMUST00000122133 279 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm23888-201ENSMUST00000122690 253 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm4613-201ENSMUST00000165488 276 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm24157-201ENSMUST00000175265 111 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm23139-201ENSMUST00000179454 132 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm26528-201ENSMUST00000181965 283 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm18699-201ENSMUST00000190713 243 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm37017-201ENSMUST00000195266 747 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm43396-201ENSMUST00000197506 706 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm17833-201ENSMUST00000197629 1065 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm19175-201ENSMUST00000199895 916 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm42883-201ENSMUST00000202594 222 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm4585-201ENSMUST00000207218 452 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm18907-201ENSMUST00000209719 932 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm9604-201ENSMUST00000211175 433 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm9231-201ENSMUST00000220817 1009 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm6011-201ENSMUST00000211736 1796 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm43775-201ENSMUST00000201019 3395 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm44101-201ENSMUST00000203951 2221 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm44021-201ENSMUST00000203055 3516 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm22781-201ENSMUST00000104083 137 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm7821-201ENSMUST00000117111 788 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm12944-201ENSMUST00000119262 463 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm15316-201ENSMUST00000121082 421 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm25505-201ENSMUST00000157220 246 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm26323-201ENSMUST00000157743 175 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm22533-201ENSMUST00000158821 274 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm8357-201ENSMUST00000181115 1011 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Mir7669-201ENSMUST00000183442 58 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Mir6908-201ENSMUST00000184056 63 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm28195-201ENSMUST00000186992 372 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm38030-201ENSMUST00000192376 475 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm8101-201ENSMUST00000192796 478 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm4525-201ENSMUST00000198831 254 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm21054-201ENSMUST00000203981 380 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm43905-201ENSMUST00000204516 204 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm44943-201ENSMUST00000207254 300 ntBASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cdc40Q9DC48 Gm18655-201ENSMUST00000214802 1090 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 117.2 ms