Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm37152-201ENSMUST00000193369 1175 ntBASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm44471-201ENSMUST00000197963 100 ntBASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm18655-201ENSMUST00000214802 1090 ntBASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm9985-201ENSMUST00000044101 510 ntBASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 AC091783.1-201ENSMUST00000223614 1613 ntBASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm44093-201ENSMUST00000204381 1802 ntBASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 AC154747.4-203ENSMUST00000225893 1384 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Gm43953-201ENSMUST00000203709 2867 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Gm14891-201ENSMUST00000117378 596 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Gm14489-201ENSMUST00000120868 901 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Gm12593-201ENSMUST00000120981 743 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Gm23888-201ENSMUST00000122690 253 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Gm17786-201ENSMUST00000182000 427 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Gm7341-201ENSMUST00000192183 926 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 AC154904.1-201ENSMUST00000219510 312 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 AC110176.1-201ENSMUST00000226219 504 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 n-R5s41-201ENSMUST00000083025 119 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Gm10845-202ENSMUST00000228217 3389 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Smc1aQ9CU62 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
Smc1aQ9CU62 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Smc1aQ9CU62 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Gm37254-201ENSMUST00000193542 3901 ntBASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Gm26419-201ENSMUST00000104272 133 ntBASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Gm14864-201ENSMUST00000116164 1087 ntBASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Gm12903-201ENSMUST00000121015 544 ntBASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Gm15644-201ENSMUST00000121764 387 ntBASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Gm12754-201ENSMUST00000121908 454 ntBASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Gm27972-201ENSMUST00000184720 137 ntBASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Gm38373-201ENSMUST00000192042 288 ntBASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Gm42883-201ENSMUST00000202594 222 ntBASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 AC122459.3-201ENSMUST00000228508 1042 ntBASIC7.83□□□□□ -1.16
Smc1aQ9CU62 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Smc1aQ9CU62 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms