Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm25557-201ENSMUST00000158084 315 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Mir8099-2-201ENSMUST00000183568 127 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Mir8099-1-201ENSMUST00000184238 127 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm20885-201ENSMUST00000190192 654 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm29740-201ENSMUST00000193182 655 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm36866-201ENSMUST00000193343 657 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm36047-201ENSMUST00000193659 657 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm20857-201ENSMUST00000194766 657 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm20858-201ENSMUST00000195459 657 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm43794-201ENSMUST00000200971 692 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm44282-201ENSMUST00000203199 190 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm18943-201ENSMUST00000207357 1216 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 AC155834.1-201ENSMUST00000220033 498 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 AC154636.3-201ENSMUST00000221489 1214 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 AC163038.4-201ENSMUST00000224942 474 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Nsa2-203ENSMUST00000225410 974 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm45360-201ENSMUST00000210698 1405 ntBASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Trim11Q99PQ2 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trim11Q99PQ2 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
Trim11Q99PQ2 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Trim11Q99PQ2 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Trim11Q99PQ2 Gm37283-201ENSMUST00000193111 1571 ntBASIC8.52□□□□□ -1.04
Trim11Q99PQ2 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.52□□□□□ -1.04
Trim11Q99PQ2 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.04
Trim11Q99PQ2 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm24462-201ENSMUST00000102430 106 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm13858-201ENSMUST00000118862 671 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm22562-201ENSMUST00000157334 111 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm25455-201ENSMUST00000157946 325 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm23007-201ENSMUST00000158951 177 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm7436-201ENSMUST00000187229 391 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm18183-201ENSMUST00000191024 615 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm29739-201ENSMUST00000191760 529 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm43595-201ENSMUST00000196464 1071 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm43235-201ENSMUST00000200121 297 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Gm18899-201ENSMUST00000217663 546 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 AC111046.1-201ENSMUST00000217715 412 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim11Q99PQ2 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms