Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Gm10936-201ENSMUST00000105264 252 ntBASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Gm12321-201ENSMUST00000121485 804 ntBASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Gm8192-201ENSMUST00000182196 958 ntBASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Gm5080-201ENSMUST00000220341 743 ntBASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 AC146596.1-201ENSMUST00000223507 223 ntBASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc38Q8CDN8 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Gm42727-201ENSMUST00000202446 2823 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Gm6746-201ENSMUST00000108774 483 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Gm11796-201ENSMUST00000120208 972 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Gm15158-201ENSMUST00000120577 570 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Gm15188-201ENSMUST00000121264 704 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Gm26480-201ENSMUST00000122619 297 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 n-R5s201-201ENSMUST00000122622 116 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Gm24228-201ENSMUST00000158829 129 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Gm37977-201ENSMUST00000193096 721 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 AC127224.1-201ENSMUST00000218094 453 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 AC151901.1-201ENSMUST00000218274 180 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Gm17611-202ENSMUST00000220613 814 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc38Q8CDN8 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm45112-201ENSMUST00000208576 5125 ntBASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm42668-201ENSMUST00000200747 2487 ntBASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Mir760-201ENSMUST00000103257 119 ntBASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm11865-201ENSMUST00000118093 859 ntBASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm15362-201ENSMUST00000121459 388 ntBASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm7393-201ENSMUST00000172650 739 ntBASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC7.78□□□□□ -1.16
Ccdc38Q8CDN8 Gm4373-201ENSMUST00000178571 556 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms