Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC9.75□□□□□ -0.85
Usp47Q8BY87 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Usp47Q8BY87 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
Usp47Q8BY87 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC9.75□□□□□ -0.85
Usp47Q8BY87 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Usp47Q8BY87 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Usp47Q8BY87 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC9.75□□□□□ -0.85
Usp47Q8BY87 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
Usp47Q8BY87 Gm15712-201ENSMUST00000120369 1156 ntBASIC9.75□□□□□ -0.85
Usp47Q8BY87 Gm14741-201ENSMUST00000120777 1009 ntBASIC9.75□□□□□ -0.85
Usp47Q8BY87 Gm12804-201ENSMUST00000121030 999 ntBASIC9.75□□□□□ -0.85
Usp47Q8BY87 Gm23756-201ENSMUST00000157582 114 ntBASIC9.75□□□□□ -0.85
Usp47Q8BY87 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC9.75□□□□□ -0.85
Usp47Q8BY87 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Usp47Q8BY87 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC9.75□□□□□ -0.85
Usp47Q8BY87 Gm29464-201ENSMUST00000187692 513 ntBASIC9.75□□□□□ -0.85
Usp47Q8BY87 Gm17895-201ENSMUST00000194028 874 ntBASIC9.75□□□□□ -0.85
Usp47Q8BY87 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC9.75□□□□□ -0.85
Usp47Q8BY87 Gm43089-201ENSMUST00000199162 275 ntBASIC9.75□□□□□ -0.85
Usp47Q8BY87 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Usp47Q8BY87 Gm45899-201ENSMUST00000212196 1276 ntBASIC9.75□□□□□ -0.85
Usp47Q8BY87 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Usp47Q8BY87 AC138329.1-201ENSMUST00000225040 471 ntBASIC9.75□□□□□ -0.85
Usp47Q8BY87 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC9.75□□□□□ -0.85
Usp47Q8BY87 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Usp47Q8BY87 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Usp47Q8BY87 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Usp47Q8BY87 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm37755-201ENSMUST00000195880 2179 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm36930-201ENSMUST00000195431 2376 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm5456-201ENSMUST00000170706 844 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm17045-201ENSMUST00000178600 844 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm29357-201ENSMUST00000186877 698 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm7019-201ENSMUST00000194122 369 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm43459-201ENSMUST00000202093 331 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm43867-201ENSMUST00000203860 525 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm44705-201ENSMUST00000206719 339 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm17950-201ENSMUST00000214617 646 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm18914-201ENSMUST00000214625 616 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 AC125064.1-201ENSMUST00000225801 295 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm44185-201ENSMUST00000204539 3307 ntBASIC9.74□□□□□ -0.85
Usp47Q8BY87 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Usp47Q8BY87 Gm43766-201ENSMUST00000200590 5417 ntBASIC9.73□□□□□ -0.85
Usp47Q8BY87 Gm43681-201ENSMUST00000201581 1903 ntBASIC9.73□□□□□ -0.85
Usp47Q8BY87 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Usp47Q8BY87 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Usp47Q8BY87 AC159196.3-201ENSMUST00000224307 1841 ntBASIC9.73□□□□□ -0.85
Usp47Q8BY87 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Gm16123-201ENSMUST00000118647 1517 ntBASIC9.73□□□□□ -0.85
Usp47Q8BY87 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Gm43128-201ENSMUST00000202212 1621 ntBASIC9.73□□□□□ -0.85
Usp47Q8BY87 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Gm14000-201ENSMUST00000118670 233 ntBASIC9.73□□□□□ -0.85
Usp47Q8BY87 Gm14613-201ENSMUST00000122239 752 ntBASIC9.73□□□□□ -0.85
Usp47Q8BY87 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Usp47Q8BY87 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC9.73□□□□□ -0.85
Usp47Q8BY87 Gm5871-201ENSMUST00000176461 718 ntBASIC9.73□□□□□ -0.85
Usp47Q8BY87 Gm21392-201ENSMUST00000182950 972 ntBASIC9.73□□□□□ -0.85
Usp47Q8BY87 Gm7270-201ENSMUST00000195818 1128 ntBASIC9.73□□□□□ -0.85
Usp47Q8BY87 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC9.73□□□□□ -0.85
Usp47Q8BY87 Gm5928-201ENSMUST00000221839 466 ntBASIC9.73□□□□□ -0.85
Usp47Q8BY87 AC123665.3-201ENSMUST00000228735 1216 ntBASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms