Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Mir697-201ENSMUST00000102316 109 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Gm15739-201ENSMUST00000118049 872 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Gm12740-201ENSMUST00000118794 308 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Gm11198-201ENSMUST00000119771 974 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Mir1231-201ENSMUST00000175639 81 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Gm29354-201ENSMUST00000187613 696 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Gm45756-201ENSMUST00000212491 407 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Gm19217-201ENSMUST00000218238 328 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 AC124715.1-201ENSMUST00000228480 754 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Gm4953-201ENSMUST00000077309 483 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Snora9-201ENSMUST00000082579 133 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Gm11282-201ENSMUST00000119018 1416 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Gm7961-201ENSMUST00000201338 1436 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 AC152922.2-201ENSMUST00000213353 3879 ntBASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Chmp2bQ8BJF9 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm42772-201ENSMUST00000199945 3041 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm14158-201ENSMUST00000118409 308 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm15778-201ENSMUST00000118469 608 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm5319-201ENSMUST00000118965 873 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm15188-201ENSMUST00000121264 704 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm23891-201ENSMUST00000158114 138 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm24228-201ENSMUST00000158829 129 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm4373-201ENSMUST00000178571 556 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm18349-201ENSMUST00000187440 904 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Ighv1-38-201ENSMUST00000192755 349 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm43926-201ENSMUST00000203978 430 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 AC139209.2-201ENSMUST00000227680 1208 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm5528-201ENSMUST00000076314 480 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm24046-201ENSMUST00000083111 165 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp2bQ8BJF9 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Chmp2bQ8BJF9 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms