Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Sec24c-202ENSMUST00000223751 4196 ntBASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 AC165260.6-206ENSMUST00000223884 3698 ntBASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 CT010453.1-201ENSMUST00000226795 2201 ntBASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC8.28□□□□□ -1.08
Vps54Q5SPW0 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC8.28□□□□□ -1.08
Vps54Q5SPW0 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Gm7289-201ENSMUST00000168993 734 ntBASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Gm37689-201ENSMUST00000193139 275 ntBASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Gm43906-201ENSMUST00000203194 906 ntBASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Gm44411-201ENSMUST00000204172 349 ntBASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Gm45739-201ENSMUST00000213094 388 ntBASIC8.28□□□□□ -1.08
Vps54Q5SPW0 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 AC124510.2-201ENSMUST00000221958 683 ntBASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Gm9315-201ENSMUST00000222696 908 ntBASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 AW822073-201ENSMUST00000075305 555 ntBASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 AC162301.1-201ENSMUST00000228785 1542 ntBASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC8.27□□□□□ -1.08
Vps54Q5SPW0 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Vps54Q5SPW0 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Vps54Q5SPW0 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm28667-201ENSMUST00000189873 2171 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm15129-201ENSMUST00000119673 279 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm14716-201ENSMUST00000120138 718 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Vps54Q5SPW0 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm16297-201ENSMUST00000161466 459 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm23810-201ENSMUST00000175150 74 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm27804-201ENSMUST00000185135 119 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm7867-201ENSMUST00000189856 546 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm29605-201ENSMUST00000190800 292 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm36965-201ENSMUST00000193797 394 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm44227-201ENSMUST00000203576 241 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm44823-201ENSMUST00000204775 1107 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC8.27□□□□□ -1.09
Vps54Q5SPW0 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm7252-201ENSMUST00000223284 456 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm2754-201ENSMUST00000223383 589 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 AC159188.3-201ENSMUST00000224199 880 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 AC154834.1-201ENSMUST00000224697 358 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Vps54Q5SPW0 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Vps54Q5SPW0 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Vps54Q5SPW0 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Vps54Q5SPW0 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Mir674-201ENSMUST00000102421 100 ntBASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Gm13141-201ENSMUST00000117417 456 ntBASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Gm25722-201ENSMUST00000157498 279 ntBASIC8.26□□□□□ -1.09
Vps54Q5SPW0 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Gm8524-201ENSMUST00000186232 379 ntBASIC8.26□□□□□ -1.09
Vps54Q5SPW0 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Gm43396-201ENSMUST00000197506 706 ntBASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Gm44856-201ENSMUST00000206639 304 ntBASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC8.26□□□□□ -1.09
Vps54Q5SPW0 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms