Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm15481-201ENSMUST00000120264 539 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC5.66□□□□□ -1.5
Cdx4Q07424 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm17047-201ENSMUST00000167709 430 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm23187-201ENSMUST00000175746 86 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm26959-201ENSMUST00000182376 978 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm9556-201ENSMUST00000182938 940 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm21430-201ENSMUST00000182998 998 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Mir6340-201ENSMUST00000183857 119 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm28186-201ENSMUST00000187447 679 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm29355-201ENSMUST00000188178 697 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm28953-201ENSMUST00000188336 697 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm28443-201ENSMUST00000189081 698 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm20788-201ENSMUST00000190538 697 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm28466-201ENSMUST00000190678 659 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm4785-201ENSMUST00000191025 751 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm37700-201ENSMUST00000192617 965 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm37395-201ENSMUST00000194721 697 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm18428-201ENSMUST00000194986 791 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm20690-202ENSMUST00000195126 355 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm43542-201ENSMUST00000199505 379 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm43226-201ENSMUST00000202438 259 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm5723-201ENSMUST00000203096 432 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm44656-201ENSMUST00000208428 490 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 AC153801.1-201ENSMUST00000217904 947 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 AC116502.1-201ENSMUST00000220989 291 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 AC126673.2-201ENSMUST00000221052 686 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 AC165287.1-201ENSMUST00000224985 178 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 AC154461.5-201ENSMUST00000225429 774 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cdx4Q07424 AC152940.1-201ENSMUST00000226504 139 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cdx4Q07424 AC123658.1-201ENSMUST00000228364 867 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm37283-201ENSMUST00000193111 1571 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 AC159193.3-201ENSMUST00000221902 2622 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm42630-201ENSMUST00000195908 3448 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm43515-201ENSMUST00000197930 2141 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 AC105407.2-205ENSMUST00000224680 2733 ntBASIC5.66□□□□□ -1.5
Cdx4Q07424 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdx4Q07424 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx4Q07424 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm28583-201ENSMUST00000188903 2141 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm34294-201ENSMUST00000191912 4263 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdx4Q07424 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm25546-201ENSMUST00000103977 132 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.5
Cdx4Q07424 Defa-ps7-201ENSMUST00000117139 168 ntBASIC5.65□□□□□ -1.5
Cdx4Q07424 Gm14509-201ENSMUST00000117312 1286 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms