Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.48□□□□□ -1.37
Col8a1Q00780 AC153561.1-201ENSMUST00000215943 469 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm18591-201ENSMUST00000220568 763 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.48□□□□□ -1.37
Col8a1Q00780 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Tprkb-201ENSMUST00000067137 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 AC101875.1-201ENSMUST00000222666 2223 ntBASIC6.48□□□□□ -1.37
Col8a1Q00780 Tdpoz1-201ENSMUST00000094413 2237 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col8a1Q00780 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC6.47□□□□□ -1.37
Col8a1Q00780 CT009530.1-201ENSMUST00000227348 2927 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Dalir-201ENSMUST00000188773 2170 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 AC164433.1-201ENSMUST00000226138 1544 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm18637-201ENSMUST00000217665 1900 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm4342-201ENSMUST00000118982 367 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm13633-201ENSMUST00000120668 898 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm15596-201ENSMUST00000121139 784 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm16523-201ENSMUST00000121253 592 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm16456-201ENSMUST00000174431 920 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm25692-201ENSMUST00000175444 125 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm27033-201ENSMUST00000183226 544 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm27684-201ENSMUST00000183778 80 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm27755-201ENSMUST00000184623 132 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm28503-201ENSMUST00000185966 147 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm29240-201ENSMUST00000187248 286 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm8004-201ENSMUST00000187782 617 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm29576-201ENSMUST00000188020 678 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm29184-201ENSMUST00000190038 334 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm28164-201ENSMUST00000190143 442 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm28354-201ENSMUST00000190904 678 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm37543-201ENSMUST00000192443 1031 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm18150-201ENSMUST00000195341 645 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm43048-201ENSMUST00000196101 388 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm43542-201ENSMUST00000199505 379 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm44909-201ENSMUST00000208756 165 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm17850-201ENSMUST00000210023 1154 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Gm5339-201ENSMUST00000210551 1102 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col8a1Q00780 CT009765.2-201ENSMUST00000221331 392 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.47□□□□□ -1.37
Col8a1Q00780 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.47□□□□□ -1.37
Col8a1Q00780 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms