Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC8.2□□□□□ -1.1
Nub1P54729 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC8.2□□□□□ -1.1
Nub1P54729 Gm18537-201ENSMUST00000205709 989 ntBASIC8.2□□□□□ -1.1
Nub1P54729 CT025685.1-201ENSMUST00000213716 150 ntBASIC8.2□□□□□ -1.1
Nub1P54729 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC8.2□□□□□ -1.1
Nub1P54729 AL772397.1-201ENSMUST00000216707 606 ntBASIC8.2□□□□□ -1.1
Nub1P54729 AC104906.1-201ENSMUST00000218122 913 ntBASIC8.2□□□□□ -1.1
Nub1P54729 AC154649.2-201ENSMUST00000228189 808 ntBASIC8.2□□□□□ -1.1
Nub1P54729 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Nub1P54729 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Nub1P54729 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Nub1P54729 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.2□□□□□ -1.1
Nub1P54729 Gm44950-201ENSMUST00000206403 2296 ntBASIC8.2□□□□□ -1.1
Nub1P54729 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Nub1P54729 Gm43842-201ENSMUST00000202890 2982 ntBASIC8.2□□□□□ -1.1
Nub1P54729 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.2□□□□□ -1.1
Nub1P54729 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Nub1P54729 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nub1P54729 AC154597.1-201ENSMUST00000224095 2713 ntBASIC8.2□□□□□ -1.1
Nub1P54729 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC8.2□□□□□ -1.1
Nub1P54729 Gm37772-201ENSMUST00000191635 1394 ntBASIC8.2□□□□□ -1.1
Nub1P54729 AC122408.2-201ENSMUST00000217901 1391 ntBASIC8.2□□□□□ -1.1
Nub1P54729 AC117608.2-201ENSMUST00000224124 1363 ntBASIC8.2□□□□□ -1.1
Nub1P54729 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nub1P54729 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nub1P54729 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nub1P54729 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Nub1P54729 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Nub1P54729 Gm28791-201ENSMUST00000185888 1779 ntBASIC8.2□□□□□ -1.1
Nub1P54729 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Nub1P54729 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Nub1P54729 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nub1P54729 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Nub1P54729 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nub1P54729 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC8.19□□□□□ -1.1
Nub1P54729 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
Nub1P54729 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nub1P54729 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Nub1P54729 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nub1P54729 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC8.19□□□□□ -1.1
Nub1P54729 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC8.19□□□□□ -1.1
Nub1P54729 Gm13690-201ENSMUST00000118989 285 ntBASIC8.19□□□□□ -1.1
Nub1P54729 Gm11259-201ENSMUST00000120554 715 ntBASIC8.19□□□□□ -1.1
Nub1P54729 Gm11474-201ENSMUST00000120814 277 ntBASIC8.19□□□□□ -1.1
Nub1P54729 Gm16523-201ENSMUST00000121253 592 ntBASIC8.19□□□□□ -1.1
Nub1P54729 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC8.19□□□□□ -1.1
Nub1P54729 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC8.19□□□□□ -1.1
Nub1P54729 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nub1P54729 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nub1P54729 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC8.19□□□□□ -1.1
Nub1P54729 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nub1P54729 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC8.19□□□□□ -1.1
Nub1P54729 Gm38166-201ENSMUST00000191660 471 ntBASIC8.19□□□□□ -1.1
Nub1P54729 Gm38078-201ENSMUST00000192771 392 ntBASIC8.19□□□□□ -1.1
Nub1P54729 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC8.19□□□□□ -1.1
Nub1P54729 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC8.19□□□□□ -1.1
Nub1P54729 Gm7542-201ENSMUST00000201140 777 ntBASIC8.19□□□□□ -1.1
Nub1P54729 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nub1P54729 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC8.19□□□□□ -1.1
Nub1P54729 AC126939.4-201ENSMUST00000225360 743 ntBASIC8.19□□□□□ -1.1
Nub1P54729 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Nub1P54729 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Nub1P54729 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Nub1P54729 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Nub1P54729 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nub1P54729 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nub1P54729 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Nub1P54729 Gm44117-201ENSMUST00000204442 1758 ntBASIC8.19□□□□□ -1.1
Nub1P54729 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Nub1P54729 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Nub1P54729 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nub1P54729 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nub1P54729 Gm2065-201ENSMUST00000194697 2757 ntBASIC8.19□□□□□ -1.1
Nub1P54729 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Nub1P54729 Gm38300-201ENSMUST00000194245 1870 ntBASIC8.19□□□□□ -1.1
Nub1P54729 Gm43211-201ENSMUST00000196901 1899 ntBASIC8.19□□□□□ -1.1
Nub1P54729 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC8.19□□□□□ -1.1
Nub1P54729 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC8.19□□□□□ -1.1
Nub1P54729 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nub1P54729 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.19□□□□□ -1.1
Nub1P54729 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Nub1P54729 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Nub1P54729 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC8.19□□□□□ -1.1
Nub1P54729 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.19□□□□□ -1.1
Nub1P54729 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Nub1P54729 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
Nub1P54729 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Nub1P54729 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Nub1P54729 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC8.18□□□□□ -1.1
Nub1P54729 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC8.18□□□□□ -1.1
Nub1P54729 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Nub1P54729 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Nub1P54729 Gm26377-201ENSMUST00000102184 108 ntBASIC8.18□□□□□ -1.1
Nub1P54729 Gm5228-201ENSMUST00000117186 357 ntBASIC8.18□□□□□ -1.1
Nub1P54729 Gm11393-201ENSMUST00000118019 288 ntBASIC8.18□□□□□ -1.1
Nub1P54729 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC8.18□□□□□ -1.1
Nub1P54729 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC8.18□□□□□ -1.1
Nub1P54729 Gm23117-201ENSMUST00000158482 108 ntBASIC8.18□□□□□ -1.1
Nub1P54729 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC8.18□□□□□ -1.1
Nub1P54729 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms