Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cux1P53564 Gm4806-201ENSMUST00000222704 1690 ntBASIC10.58□□□□□ -0.72
Cux1P53564 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cux1P53564 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cux1P53564 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cux1P53564 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cux1P53564 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Cux1P53564 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cux1P53564 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC10.58□□□□□ -0.72
Cux1P53564 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cux1P53564 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cux1P53564 Gm31049-201ENSMUST00000201516 1302 ntBASIC10.58□□□□□ -0.72
Cux1P53564 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cux1P53564 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cux1P53564 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cux1P53564 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cux1P53564 Gm5319-201ENSMUST00000118965 873 ntBASIC10.58□□□□□ -0.72
Cux1P53564 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cux1P53564 Gm23896-201ENSMUST00000158109 130 ntBASIC10.58□□□□□ -0.72
Cux1P53564 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cux1P53564 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC10.58□□□□□ -0.72
Cux1P53564 Gm27005-201ENSMUST00000182783 921 ntBASIC10.58□□□□□ -0.72
Cux1P53564 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cux1P53564 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cux1P53564 Gm28918-201ENSMUST00000188822 699 ntBASIC10.58□□□□□ -0.72
Cux1P53564 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cux1P53564 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC10.58□□□□□ -0.72
Cux1P53564 Gm38840-201ENSMUST00000204716 843 ntBASIC10.58□□□□□ -0.72
Cux1P53564 Gm45122-201ENSMUST00000206376 784 ntBASIC10.58□□□□□ -0.72
Cux1P53564 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cux1P53564 Gm15732-201ENSMUST00000079794 480 ntBASIC10.58□□□□□ -0.72
Cux1P53564 Gm24695-201ENSMUST00000083877 83 ntBASIC10.58□□□□□ -0.72
Cux1P53564 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cux1P53564 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cux1P53564 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cux1P53564 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Cux1P53564 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cux1P53564 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC10.57□□□□□ -0.72
Cux1P53564 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cux1P53564 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC10.57□□□□□ -0.72
Cux1P53564 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cux1P53564 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Cux1P53564 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cux1P53564 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cux1P53564 Snora35-201ENSMUST00000104579 128 ntBASIC10.57□□□□□ -0.72
Cux1P53564 Gm11504-201ENSMUST00000120211 173 ntBASIC10.57□□□□□ -0.72
Cux1P53564 Gm8648-201ENSMUST00000122457 221 ntBASIC10.57□□□□□ -0.72
Cux1P53564 Gm22655-201ENSMUST00000174949 96 ntBASIC10.57□□□□□ -0.72
Cux1P53564 Gm27512-201ENSMUST00000175328 126 ntBASIC10.57□□□□□ -0.72
Cux1P53564 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC10.57□□□□□ -0.72
Cux1P53564 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC10.57□□□□□ -0.72
Cux1P53564 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cux1P53564 Gm44360-201ENSMUST00000200081 82 ntBASIC10.57□□□□□ -0.72
Cux1P53564 Gm7463-201ENSMUST00000201541 547 ntBASIC10.57□□□□□ -0.72
Cux1P53564 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC10.57□□□□□ -0.72
Cux1P53564 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cux1P53564 Gm17950-201ENSMUST00000214617 646 ntBASIC10.57□□□□□ -0.72
Cux1P53564 AC163660.1-201ENSMUST00000223696 818 ntBASIC10.57□□□□□ -0.72
Cux1P53564 AC105407.1-201ENSMUST00000225684 614 ntBASIC10.57□□□□□ -0.72
Cux1P53564 AC137871.3-201ENSMUST00000226628 225 ntBASIC10.57□□□□□ -0.72
Cux1P53564 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cux1P53564 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cux1P53564 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cux1P53564 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cux1P53564 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cux1P53564 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cux1P53564 Gm3555-201ENSMUST00000160287 1395 ntBASIC10.57□□□□□ -0.72
Cux1P53564 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cux1P53564 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cux1P53564 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Cux1P53564 Gm43880-201ENSMUST00000203635 2162 ntBASIC10.56□□□□□ -0.72
Cux1P53564 AC129308.2-203ENSMUST00000224109 2385 ntBASIC10.56□□□□□ -0.72
Cux1P53564 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cux1P53564 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Cux1P53564 Gm15000-201ENSMUST00000118275 1243 ntBASIC10.56□□□□□ -0.72
Cux1P53564 Gm13835-201ENSMUST00000118459 685 ntBASIC10.56□□□□□ -0.72
Cux1P53564 Gm12630-201ENSMUST00000121575 784 ntBASIC10.56□□□□□ -0.72
Cux1P53564 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC10.56□□□□□ -0.72
Cux1P53564 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC10.56□□□□□ -0.72
Cux1P53564 BC049739-201ENSMUST00000202626 660 ntBASIC10.56□□□□□ -0.72
Cux1P53564 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC10.56□□□□□ -0.72
Cux1P53564 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC10.56□□□□□ -0.72
Cux1P53564 Gm4803-201ENSMUST00000218729 1279 ntBASIC10.56□□□□□ -0.72
Cux1P53564 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Cux1P53564 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cux1P53564 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms