Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
HttP42859 Gm14335-201ENSMUST00000119165 810 ntBASIC7.07□□□□□ -1.28
HttP42859 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HttP42859 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
HttP42859 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
HttP42859 Gm5139-201ENSMUST00000175943 249 ntBASIC7.07□□□□□ -1.28
HttP42859 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HttP42859 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.07□□□□□ -1.28
HttP42859 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HttP42859 Rbm12-202ENSMUST00000109604 6635 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HttP42859 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
HttP42859 Gm38142-201ENSMUST00000194093 3555 ntBASIC7.07□□□□□ -1.28
HttP42859 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
HttP42859 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HttP42859 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HttP42859 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
HttP42859 Gm37457-201ENSMUST00000193639 2433 ntBASIC7.07□□□□□ -1.28
HttP42859 Gm42440-201ENSMUST00000197906 2284 ntBASIC7.07□□□□□ -1.28
HttP42859 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC7.07□□□□□ -1.28
HttP42859 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
HttP42859 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.07□□□□□ -1.28
HttP42859 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC7.07□□□□□ -1.28
HttP42859 Gm15621-201ENSMUST00000119162 364 ntBASIC7.07□□□□□ -1.28
HttP42859 Gm14520-201ENSMUST00000119258 387 ntBASIC7.07□□□□□ -1.28
HttP42859 Gm15187-201ENSMUST00000122329 264 ntBASIC7.07□□□□□ -1.28
HttP42859 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC7.07□□□□□ -1.28
HttP42859 Gm26489-201ENSMUST00000157880 264 ntBASIC7.07□□□□□ -1.28
HttP42859 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC7.07□□□□□ -1.28
HttP42859 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
HttP42859 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
HttP42859 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC7.07□□□□□ -1.28
HttP42859 Gm28976-201ENSMUST00000188070 144 ntBASIC7.07□□□□□ -1.28
HttP42859 Gm28266-201ENSMUST00000191410 439 ntBASIC7.07□□□□□ -1.28
HttP42859 Gm42502-201ENSMUST00000198550 1089 ntBASIC7.07□□□□□ -1.28
HttP42859 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
HttP42859 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
HttP42859 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HttP42859 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC7.06□□□□□ -1.28
HttP42859 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC7.06□□□□□ -1.28
HttP42859 Pcdhga2-201ENSMUST00000193869 4689 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Gm18290-201ENSMUST00000202900 844 ntBASIC7.06□□□□□ -1.28
HttP42859 Gm45122-201ENSMUST00000206376 784 ntBASIC7.06□□□□□ -1.28
HttP42859 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC7.06□□□□□ -1.28
HttP42859 AC168056.2-201ENSMUST00000223591 269 ntBASIC7.06□□□□□ -1.28
HttP42859 AC122858.1-201ENSMUST00000226212 433 ntBASIC7.06□□□□□ -1.28
HttP42859 AC122858.3-201ENSMUST00000226341 740 ntBASIC7.06□□□□□ -1.28
HttP42859 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
HttP42859 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
HttP42859 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
HttP42859 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC7.06□□□□□ -1.28
HttP42859 Gm37372-201ENSMUST00000193577 3311 ntBASIC7.06□□□□□ -1.28
HttP42859 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Gm24236-201ENSMUST00000157794 134 ntBASIC7.06□□□□□ -1.28
HttP42859 Gm22262-201ENSMUST00000158713 86 ntBASIC7.06□□□□□ -1.28
HttP42859 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HttP42859 Gm22690-201ENSMUST00000175054 110 ntBASIC7.06□□□□□ -1.28
HttP42859 Gm23011-202ENSMUST00000197855 275 ntBASIC7.06□□□□□ -1.28
HttP42859 Gm42584-201ENSMUST00000201404 220 ntBASIC7.06□□□□□ -1.28
HttP42859 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC7.06□□□□□ -1.28
HttP42859 AC153961.2-201ENSMUST00000218877 164 ntBASIC7.06□□□□□ -1.28
HttP42859 Mir375-201ENSMUST00000083682 64 ntBASIC7.06□□□□□ -1.28
HttP42859 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HttP42859 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
HttP42859 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC7.06□□□□□ -1.28
HttP42859 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Emc1-202ENSMUST00000082262 6226 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.06□□□□□ -1.28
HttP42859 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
HttP42859 Gm44229-201ENSMUST00000203211 2487 ntBASIC7.06□□□□□ -1.28
HttP42859 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HttP42859 Frk-201ENSMUST00000019913 4696 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HttP42859 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
HttP42859 Epb42-202ENSMUST00000102490 4115 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HttP42859 Gm12808-201ENSMUST00000120597 404 ntBASIC7.05□□□□□ -1.28
HttP42859 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HttP42859 Gm9238-201ENSMUST00000196181 329 ntBASIC7.05□□□□□ -1.28
HttP42859 Gm2011-203ENSMUST00000203750 435 ntBASIC7.05□□□□□ -1.28
HttP42859 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC7.05□□□□□ -1.28
HttP42859 Gm9292-201ENSMUST00000222008 710 ntBASIC7.05□□□□□ -1.28
HttP42859 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HttP42859 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
HttP42859 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HttP42859 Olfr1426-206ENSMUST00000219996 2436 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
HttP42859 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HttP42859 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms