Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Cxcl12P40224 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cxcl12P40224 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cxcl12P40224 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC7.24□□□□□ -1.25
Cxcl12P40224 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Cxcl12P40224 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC7.24□□□□□ -1.25
Cxcl12P40224 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cxcl12P40224 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cxcl12P40224 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Cxcl12P40224 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC7.24□□□□□ -1.25
Cxcl12P40224 Gm15750-201ENSMUST00000120970 616 ntBASIC7.24□□□□□ -1.25
Cxcl12P40224 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.24□□□□□ -1.25
Cxcl12P40224 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC7.24□□□□□ -1.25
Cxcl12P40224 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cxcl12P40224 Gm26729-201ENSMUST00000180744 352 ntBASIC7.24□□□□□ -1.25
Cxcl12P40224 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Cxcl12P40224 Gm27295-201ENSMUST00000184264 153 ntBASIC7.24□□□□□ -1.25
Cxcl12P40224 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cxcl12P40224 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC7.24□□□□□ -1.25
Cxcl12P40224 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC7.24□□□□□ -1.25
Cxcl12P40224 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.24□□□□□ -1.25
Cxcl12P40224 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.24□□□□□ -1.25
Cxcl12P40224 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Cxcl12P40224 Gm26442-201ENSMUST00000082588 153 ntBASIC7.24□□□□□ -1.25
Cxcl12P40224 Gm24924-201ENSMUST00000084007 164 ntBASIC7.24□□□□□ -1.25
Cxcl12P40224 Olfr687-201ENSMUST00000098154 938 ntBASIC7.24□□□□□ -1.25
Cxcl12P40224 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cxcl12P40224 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cxcl12P40224 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC7.24□□□□□ -1.25
Cxcl12P40224 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cxcl12P40224 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Cxcl12P40224 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC7.24□□□□□ -1.25
Cxcl12P40224 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.24□□□□□ -1.25
Cxcl12P40224 Olfr1357-201ENSMUST00000095473 1826 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Cxcl12P40224 Adgrf2-201ENSMUST00000113614 3284 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Cxcl12P40224 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.24□□□□□ -1.25
Cxcl12P40224 6430562O15Rik-202ENSMUST00000180808 3997 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Cxcl12P40224 Kcnip4-204ENSMUST00000166924 2257 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Cxcl12P40224 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Cxcl12P40224 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.23□□□□□ -1.25
Cxcl12P40224 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Cxcl12P40224 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.23□□□□□ -1.25
Cxcl12P40224 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
Cxcl12P40224 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Cxcl12P40224 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Cxcl12P40224 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm11256-201ENSMUST00000118109 829 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm14712-201ENSMUST00000120195 772 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm8061-201ENSMUST00000122380 350 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm26346-201ENSMUST00000157525 329 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm25675-201ENSMUST00000174979 118 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Mir3085-201ENSMUST00000175493 89 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm21756-201ENSMUST00000178380 930 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm21405-201ENSMUST00000179024 930 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm21191-201ENSMUST00000186484 930 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm28918-201ENSMUST00000188822 699 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm29503-201ENSMUST00000191044 930 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm38254-201ENSMUST00000192276 1009 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm37920-201ENSMUST00000192952 749 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm43233-201ENSMUST00000200491 616 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm44221-201ENSMUST00000203552 388 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm43867-201ENSMUST00000203860 525 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm44809-201ENSMUST00000208305 993 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm44911-201ENSMUST00000208436 1062 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm5055-201ENSMUST00000215697 581 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 AC132587.1-201ENSMUST00000220562 166 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC7.23□□□□□ -1.25
Cxcl12P40224 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm8526-201ENSMUST00000079153 475 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC7.23□□□□□ -1.25
Cxcl12P40224 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Cxcl12P40224 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm37304-201ENSMUST00000193833 2886 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 138.8 ms