Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm25593-201ENSMUST00000102272 96 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm14727-201ENSMUST00000118526 525 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm14721-201ENSMUST00000121381 525 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm18875-201ENSMUST00000188563 882 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm8182-201ENSMUST00000197863 769 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm2860-201ENSMUST00000199226 707 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm44252-201ENSMUST00000204187 330 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm19007-201ENSMUST00000217746 874 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 AC173482.3-201ENSMUST00000225492 1212 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Chmp6P0C0A3 Gm11342-203ENSMUST00000224879 1324 ntBASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Gm18701-201ENSMUST00000188281 1536 ntBASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Gm25311-201ENSMUST00000104136 132 ntBASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Gm27001-201ENSMUST00000182252 936 ntBASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Gm8245-201ENSMUST00000182434 987 ntBASIC7.53□□□□□ -1.2
Chmp6P0C0A3 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Gm38200-201ENSMUST00000192083 2111 ntBASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Gm9604-201ENSMUST00000211175 433 ntBASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Gm38082-201ENSMUST00000192800 6882 ntBASIC7.53□□□□□ -1.2
Chmp6P0C0A3 AC154747.4-203ENSMUST00000225893 1384 ntBASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Gm45073-201ENSMUST00000207688 4247 ntBASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
Chmp6P0C0A3 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
Chmp6P0C0A3 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.52□□□□□ -1.2
Chmp6P0C0A3 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Chmp6P0C0A3 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 150.1 ms