Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CopeO89079 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CopeO89079 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CopeO89079 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CopeO89079 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CopeO89079 Gm10845-202ENSMUST00000228217 3389 ntBASIC7.01□□□□□ -1.29
CopeO89079 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CopeO89079 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CopeO89079 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.01□□□□□ -1.29
CopeO89079 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CopeO89079 Gm13414-201ENSMUST00000117516 727 ntBASIC7.01□□□□□ -1.29
CopeO89079 Gm8534-201ENSMUST00000118553 766 ntBASIC7.01□□□□□ -1.29
CopeO89079 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.01□□□□□ -1.29
CopeO89079 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC7.01□□□□□ -1.29
CopeO89079 Gm26528-201ENSMUST00000181965 283 ntBASIC7.01□□□□□ -1.29
CopeO89079 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC7.01□□□□□ -1.29
CopeO89079 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CopeO89079 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC7.01□□□□□ -1.29
CopeO89079 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.01□□□□□ -1.29
CopeO89079 Gm7394-201ENSMUST00000209138 1032 ntBASIC7.01□□□□□ -1.29
CopeO89079 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.01□□□□□ -1.29
CopeO89079 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC7.01□□□□□ -1.29
CopeO89079 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.01□□□□□ -1.29
CopeO89079 AC157571.1-201ENSMUST00000222014 520 ntBASIC7.01□□□□□ -1.29
CopeO89079 AC118006.3-201ENSMUST00000223948 1176 ntBASIC7.01□□□□□ -1.29
CopeO89079 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CopeO89079 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CopeO89079 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CopeO89079 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CopeO89079 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CopeO89079 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CopeO89079 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CopeO89079 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.01□□□□□ -1.29
CopeO89079 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.01□□□□□ -1.29
CopeO89079 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CopeO89079 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.01□□□□□ -1.29
CopeO89079 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.01□□□□□ -1.29
CopeO89079 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CopeO89079 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CopeO89079 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7□□□□□ -1.29
CopeO89079 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CopeO89079 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
CopeO89079 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
CopeO89079 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC7□□□□□ -1.29
CopeO89079 Gm45297-201ENSMUST00000209893 3483 ntBASIC7□□□□□ -1.29
CopeO89079 Gm24048-201ENSMUST00000102411 106 ntBASIC7□□□□□ -1.29
CopeO89079 Gm13742-201ENSMUST00000118805 457 ntBASIC7□□□□□ -1.29
CopeO89079 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC7□□□□□ -1.29
CopeO89079 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7□□□□□ -1.29
CopeO89079 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC7□□□□□ -1.29
CopeO89079 Gm25722-201ENSMUST00000157498 279 ntBASIC7□□□□□ -1.29
CopeO89079 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC7□□□□□ -1.29
CopeO89079 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC7□□□□□ -1.29
CopeO89079 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC7□□□□□ -1.29
CopeO89079 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC7□□□□□ -1.29
CopeO89079 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC7□□□□□ -1.29
CopeO89079 Gm9167-201ENSMUST00000182469 962 ntBASIC7□□□□□ -1.29
CopeO89079 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7□□□□□ -1.29
CopeO89079 Gm23604-202ENSMUST00000198428 137 ntBASIC7□□□□□ -1.29
CopeO89079 Gm42883-201ENSMUST00000202594 222 ntBASIC7□□□□□ -1.29
CopeO89079 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7□□□□□ -1.29
CopeO89079 Gm45198-201ENSMUST00000206796 591 ntBASIC7□□□□□ -1.29
CopeO89079 Gm6290-201ENSMUST00000207666 1158 ntBASIC7□□□□□ -1.29
CopeO89079 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC7□□□□□ -1.29
CopeO89079 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC7□□□□□ -1.29
CopeO89079 Gm18781-201ENSMUST00000211252 924 ntBASIC7□□□□□ -1.29
CopeO89079 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC7□□□□□ -1.29
CopeO89079 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC7□□□□□ -1.29
CopeO89079 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC7□□□□□ -1.29
CopeO89079 AC139209.2-201ENSMUST00000227680 1208 ntBASIC7□□□□□ -1.29
CopeO89079 AC168062.1-201ENSMUST00000228048 769 ntBASIC7□□□□□ -1.29
CopeO89079 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC7□□□□□ -1.29
CopeO89079 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
CopeO89079 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CopeO89079 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CopeO89079 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CopeO89079 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
CopeO89079 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7□□□□□ -1.29
CopeO89079 Gm38276-201ENSMUST00000192446 1343 ntBASIC7□□□□□ -1.29
CopeO89079 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CopeO89079 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CopeO89079 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CopeO89079 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.99□□□□□ -1.29
CopeO89079 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 Gm18632-201ENSMUST00000222597 2087 ntBASIC6.99□□□□□ -1.29
CopeO89079 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CopeO89079 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.99□□□□□ -1.29
CopeO89079 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.99□□□□□ -1.29
CopeO89079 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CopeO89079 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
CopeO89079 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.99□□□□□ -1.29
CopeO89079 Gm7803-201ENSMUST00000117176 1015 ntBASIC6.99□□□□□ -1.29
CopeO89079 Gm14630-201ENSMUST00000118057 246 ntBASIC6.99□□□□□ -1.29
CopeO89079 Gm15778-201ENSMUST00000118469 608 ntBASIC6.99□□□□□ -1.29
CopeO89079 Gm15129-201ENSMUST00000119673 279 ntBASIC6.99□□□□□ -1.29
CopeO89079 Gm15928-201ENSMUST00000122455 280 ntBASIC6.99□□□□□ -1.29
CopeO89079 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.99□□□□□ -1.29
CopeO89079 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms