Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gm12632-201ENSMUST00000121223 495 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 Defa-ps10-201ENSMUST00000121649 171 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC6.76□□□□□ -1.33
Hcn3O88705 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hcn3O88705 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hcn3O88705 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hcn3O88705 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Hcn3O88705 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hcn3O88705 Gm29588-201ENSMUST00000185738 298 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 Gm28117-201ENSMUST00000188472 371 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hcn3O88705 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC6.76□□□□□ -1.33
Hcn3O88705 Gm8168-201ENSMUST00000209631 948 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 Gm7151-201ENSMUST00000211511 954 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC6.76□□□□□ -1.33
Hcn3O88705 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hcn3O88705 AC153522.1-201ENSMUST00000220047 1090 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 AC134439.2-201ENSMUST00000221950 467 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 Gm5374-202ENSMUST00000222910 314 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 AC159205.1-201ENSMUST00000225513 1099 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 CT009556.3-201ENSMUST00000226173 513 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 AC080021.1-201ENSMUST00000228104 700 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 Gm5815-201ENSMUST00000050706 1185 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 Gm9800-201ENSMUST00000052615 336 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Hcn3O88705 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC6.76□□□□□ -1.33
Hcn3O88705 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hcn3O88705 Mir135b-201ENSMUST00000083501 97 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Hcn3O88705 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hcn3O88705 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Hcn3O88705 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Hcn3O88705 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Hcn3O88705 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Hcn3O88705 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Hcn3O88705 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hcn3O88705 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Hcn3O88705 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hcn3O88705 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hcn3O88705 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Hcn3O88705 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Hcn3O88705 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Hcn3O88705 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hcn3O88705 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hcn3O88705 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Hcn3O88705 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Hcn3O88705 AC107452.3-201ENSMUST00000228807 1308 ntBASIC6.76□□□□□ -1.33
Hcn3O88705 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hcn3O88705 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Hcn3O88705 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Hcn3O88705 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hcn3O88705 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hcn3O88705 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hcn3O88705 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hcn3O88705 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC6.75□□□□□ -1.33
Hcn3O88705 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hcn3O88705 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hcn3O88705 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Hcn3O88705 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hcn3O88705 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Hcn3O88705 Mir678-201ENSMUST00000102114 84 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hcn3O88705 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Hcn3O88705 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Hcn3O88705 Gm12105-201ENSMUST00000120846 779 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Hcn3O88705 Gm7707-201ENSMUST00000165950 1156 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Hcn3O88705 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Hcn3O88705 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Hcn3O88705 Gm8192-201ENSMUST00000182196 958 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hcn3O88705 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC6.75□□□□□ -1.33
Hcn3O88705 Gm28413-201ENSMUST00000189369 291 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hcn3O88705 Gm4545-201ENSMUST00000190797 603 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hcn3O88705 Gm3841-201ENSMUST00000191399 451 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 Gm28060-201ENSMUST00000191554 189 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 Gm18529-201ENSMUST00000193025 1257 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC6.75□□□□□ -1.33
Hcn3O88705 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Hcn3O88705 Gm42965-201ENSMUST00000201254 250 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 Gm44192-201ENSMUST00000204195 556 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Hcn3O88705 Gm45078-201ENSMUST00000205343 546 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC6.75□□□□□ -1.33
Hcn3O88705 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.75□□□□□ -1.33
Hcn3O88705 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Hcn3O88705 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Hcn3O88705 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Hcn3O88705 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Hcn3O88705 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms