Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Gm44652-201ENSMUST00000208648 2854 ntBASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Gm9506-201ENSMUST00000118516 320 ntBASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Gm11370-201ENSMUST00000120583 260 ntBASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Gm23891-201ENSMUST00000158114 138 ntBASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Gm20615-201ENSMUST00000177503 705 ntBASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.69□□□□□ -1.18
Scn3aA2ASI5 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Gm45693-201ENSMUST00000211391 1157 ntBASIC7.69□□□□□ -1.18
Scn3aA2ASI5 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Gm7961-201ENSMUST00000201338 1436 ntBASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm38043-201ENSMUST00000195501 5141 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm22267-201ENSMUST00000104008 131 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm12653-201ENSMUST00000117778 561 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm22428-201ENSMUST00000158554 132 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Mir6244-201ENSMUST00000184156 117 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 AC154806.1-203ENSMUST00000227370 1032 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm24032-201ENSMUST00000083932 159 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm43221-201ENSMUST00000197612 2071 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm5601-201ENSMUST00000118909 972 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm25117-201ENSMUST00000157194 144 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Gm7769-201ENSMUST00000212900 933 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 CT025642.2-201ENSMUST00000225009 1649 ntBASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Mgat4a-201ENSMUST00000042161 7030 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Scn3aA2ASI5 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Scn3aA2ASI5 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Scn3aA2ASI5 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Scn3aA2ASI5 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms