Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 AC126554.3-201ENSMUST00000223131 493 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 AC134869.2-201ENSMUST00000225788 421 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 AC157212.1-201ENSMUST00000228398 1075 ntBASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Trim3Q9R1R2 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm25631-201ENSMUST00000104390 130 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm15484-201ENSMUST00000118871 828 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm13438-201ENSMUST00000120100 573 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm7244-201ENSMUST00000164658 455 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm18848-201ENSMUST00000182069 792 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm5272-201ENSMUST00000182730 982 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm29496-201ENSMUST00000189854 693 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm45042-201ENSMUST00000207377 211 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm25189-201ENSMUST00000083911 164 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm24924-201ENSMUST00000084007 164 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm16020-201ENSMUST00000084281 210 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm44093-201ENSMUST00000204381 1802 ntBASIC6.6□□□□□ -1.35
Trim3Q9R1R2 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.59□□□□□ -1.35
Trim3Q9R1R2 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm13744-201ENSMUST00000118953 850 ntBASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm11653-201ENSMUST00000119992 1009 ntBASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm3208-201ENSMUST00000168281 427 ntBASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm23139-201ENSMUST00000179454 132 ntBASIC6.59□□□□□ -1.35
Trim3Q9R1R2 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm18352-201ENSMUST00000189113 902 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms