Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm37548-201ENSMUST00000194519 3814 ntBASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx56Q9D0R4 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm18422-202ENSMUST00000203798 2214 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm24986-201ENSMUST00000104452 132 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm14576-201ENSMUST00000118073 1111 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm15000-201ENSMUST00000118275 1243 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm12507-201ENSMUST00000119155 415 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm12262-201ENSMUST00000119915 305 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm12297-201ENSMUST00000121380 979 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm22275-201ENSMUST00000122470 310 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm10913-201ENSMUST00000133732 463 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm2709-201ENSMUST00000142979 350 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm24782-201ENSMUST00000157641 132 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm27373-201ENSMUST00000184017 184 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm7341-201ENSMUST00000192183 926 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm43906-201ENSMUST00000203194 906 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 CT025639.2-201ENSMUST00000224440 1220 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 AC156574.1-201ENSMUST00000227084 452 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm25852-201ENSMUST00000082790 130 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm43588-201ENSMUST00000201862 2298 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm43258-201ENSMUST00000200312 1950 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm28583-201ENSMUST00000188903 2141 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 CT010470.1-201ENSMUST00000225364 1876 ntBASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
Ddx56Q9D0R4 Gm42630-201ENSMUST00000195908 3448 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm43216-201ENSMUST00000196295 1333 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm29438-201ENSMUST00000191298 2613 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm5392-201ENSMUST00000122189 789 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm3760-201ENSMUST00000167475 804 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm25574-201ENSMUST00000175245 249 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm29464-201ENSMUST00000187692 513 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms