Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Smc1aQ9CU62 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Smc1aQ9CU62 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.87□□□□□ -1.15
Smc1aQ9CU62 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC7.87□□□□□ -1.15
Smc1aQ9CU62 Gm34583-203ENSMUST00000202586 454 ntBASIC7.87□□□□□ -1.15
Smc1aQ9CU62 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.87□□□□□ -1.15
Smc1aQ9CU62 Gm45432-201ENSMUST00000210391 416 ntBASIC7.87□□□□□ -1.15
Smc1aQ9CU62 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC7.87□□□□□ -1.15
Smc1aQ9CU62 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC7.87□□□□□ -1.15
Smc1aQ9CU62 AC127224.1-201ENSMUST00000218094 453 ntBASIC7.87□□□□□ -1.15
Smc1aQ9CU62 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC7.87□□□□□ -1.15
Smc1aQ9CU62 AC115304.1-202ENSMUST00000226850 837 ntBASIC7.87□□□□□ -1.15
Smc1aQ9CU62 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.87□□□□□ -1.15
Smc1aQ9CU62 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.87□□□□□ -1.15
Smc1aQ9CU62 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Smc1aQ9CU62 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Smc1aQ9CU62 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Smc1aQ9CU62 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Smc1aQ9CU62 Gm38200-201ENSMUST00000192083 2111 ntBASIC7.87□□□□□ -1.15
Smc1aQ9CU62 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Smc1aQ9CU62 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Smc1aQ9CU62 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Smc1aQ9CU62 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm37382-201ENSMUST00000193032 1596 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm17170-201ENSMUST00000112785 316 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm13130-201ENSMUST00000119195 1166 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm16056-201ENSMUST00000119293 135 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm15316-201ENSMUST00000121082 421 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Mir7669-201ENSMUST00000183442 58 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm8004-201ENSMUST00000187782 617 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm42963-201ENSMUST00000202943 1217 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm18995-201ENSMUST00000202981 520 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm18469-201ENSMUST00000208850 439 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm45782-201ENSMUST00000212670 366 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm19217-201ENSMUST00000218238 328 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm8276-201ENSMUST00000192231 1812 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm5903-201ENSMUST00000121836 2325 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Smc1aQ9CU62 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm18537-202ENSMUST00000206215 1503 ntBASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm15913-201ENSMUST00000118492 331 ntBASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm13486-201ENSMUST00000119910 282 ntBASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Trav8-2-201ENSMUST00000130122 337 ntBASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm16357-201ENSMUST00000144091 474 ntBASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm24682-201ENSMUST00000158764 137 ntBASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC7.85□□□□□ -1.15
Smc1aQ9CU62 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms