Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.79□□□□□ -1.32
Cdh23Q99PF4 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Cdh23Q99PF4 Gm8107-201ENSMUST00000117477 2009 ntBASIC6.79□□□□□ -1.32
Cdh23Q99PF4 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC6.79□□□□□ -1.32
Cdh23Q99PF4 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cdh23Q99PF4 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdh23Q99PF4 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdh23Q99PF4 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdh23Q99PF4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cdh23Q99PF4 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cdh23Q99PF4 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Cdh23Q99PF4 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdh23Q99PF4 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdh23Q99PF4 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Cdh23Q99PF4 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdh23Q99PF4 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdh23Q99PF4 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdh23Q99PF4 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Cdh23Q99PF4 Mir3110-201ENSMUST00000175053 80 ntBASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Gm15709-201ENSMUST00000118354 213 ntBASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Gm9064-201ENSMUST00000163579 566 ntBASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Gm22548-201ENSMUST00000174899 78 ntBASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Gm27409-201ENSMUST00000184727 80 ntBASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Gm19231-201ENSMUST00000193212 830 ntBASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Gm19033-201ENSMUST00000208516 964 ntBASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC6.78□□□□□ -1.32
Cdh23Q99PF4 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.78□□□□□ -1.32
Cdh23Q99PF4 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Gm6049-201ENSMUST00000222369 458 ntBASIC6.78□□□□□ -1.32
Cdh23Q99PF4 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.78□□□□□ -1.32
Cdh23Q99PF4 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdh23Q99PF4 Gm3008-201ENSMUST00000160566 571 ntBASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Gm21392-201ENSMUST00000182950 972 ntBASIC6.77□□□□□ -1.33
Cdh23Q99PF4 AC154626.1-201ENSMUST00000226070 311 ntBASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Gm22592-201ENSMUST00000104242 131 ntBASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Gm25065-201ENSMUST00000177914 132 ntBASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Gm25891-201ENSMUST00000180050 132 ntBASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Gm27219-201ENSMUST00000184633 742 ntBASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Gm37841-201ENSMUST00000195367 376 ntBASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Gm5853-201ENSMUST00000197183 632 ntBASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Cdh23Q99PF4 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 112.6 ms