Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm44863-201ENSMUST00000207613 1422 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm25396-201ENSMUST00000103981 133 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm25379-201ENSMUST00000104338 114 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm11338-201ENSMUST00000120086 1160 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm14126-201ENSMUST00000122345 395 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm23740-201ENSMUST00000157385 100 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm17022-201ENSMUST00000166415 922 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm17212-201ENSMUST00000166666 259 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm25640-201ENSMUST00000175378 125 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm3511-201ENSMUST00000199823 204 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm7972-201ENSMUST00000208434 1137 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 CT009742.1-201ENSMUST00000222507 702 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 AC108947.1-201ENSMUST00000224274 1000 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 AC124489.1-201ENSMUST00000225852 526 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm6166-201ENSMUST00000098689 409 ntBASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Sf3a1Q8K4Z5 AC187103.1-201ENSMUST00000224641 1475 ntBASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Gm30698-201ENSMUST00000214789 3198 ntBASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Gm22774-201ENSMUST00000102084 109 ntBASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Mir199b-201ENSMUST00000175066 110 ntBASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Gm28413-201ENSMUST00000189369 291 ntBASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Gm29496-201ENSMUST00000189854 693 ntBASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Gm2860-201ENSMUST00000199226 707 ntBASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Gm44565-201ENSMUST00000208194 269 ntBASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Gm44121-201ENSMUST00000205169 2006 ntBASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Sf3a1Q8K4Z5 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Sf3a1Q8K4Z5 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sf3a1Q8K4Z5 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Sf3a1Q8K4Z5 Gm20706-201ENSMUST00000175985 2023 ntBASIC8.56□□□□□ -1.04
Sf3a1Q8K4Z5 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sf3a1Q8K4Z5 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC8.56□□□□□ -1.04
Sf3a1Q8K4Z5 Gm43872-201ENSMUST00000203218 2213 ntBASIC8.56□□□□□ -1.04
Sf3a1Q8K4Z5 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sf3a1Q8K4Z5 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Sf3a1Q8K4Z5 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sf3a1Q8K4Z5 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC8.56□□□□□ -1.04
Sf3a1Q8K4Z5 Gm22781-201ENSMUST00000104083 137 ntBASIC8.56□□□□□ -1.04
Sf3a1Q8K4Z5 Gm26419-201ENSMUST00000104272 133 ntBASIC8.56□□□□□ -1.04
Sf3a1Q8K4Z5 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Sf3a1Q8K4Z5 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sf3a1Q8K4Z5 Gm14893-201ENSMUST00000117904 282 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms