Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Amy2b-201ENSMUST00000120184 1577 ntBASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Gm24519-201ENSMUST00000104507 132 ntBASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Gm13423-201ENSMUST00000117205 888 ntBASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Gm23891-201ENSMUST00000158114 138 ntBASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Mir6769b-201ENSMUST00000184793 60 ntBASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Gm9419-201ENSMUST00000200672 567 ntBASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Brf1Q8CFK2 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 AC154597.1-201ENSMUST00000224095 2713 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm15158-201ENSMUST00000120577 570 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm6451-201ENSMUST00000121488 717 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm17217-201ENSMUST00000166613 469 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm27178-201ENSMUST00000184962 340 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm5723-201ENSMUST00000203096 432 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm2975-201ENSMUST00000209710 820 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm2774-201ENSMUST00000213650 1165 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm3678-201ENSMUST00000218888 492 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 AC134913.1-201ENSMUST00000224563 504 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 AC115304.1-202ENSMUST00000226850 837 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Mir138-2-201ENSMUST00000083578 71 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm38200-201ENSMUST00000192083 2111 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm37077-201ENSMUST00000195723 3691 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm21781-201ENSMUST00000178920 4838 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Brf1Q8CFK2 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Gm42885-201ENSMUST00000200763 4214 ntBASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 AC158115.1-201ENSMUST00000222830 3182 ntBASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Gm42549-201ENSMUST00000202392 7004 ntBASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Gm25574-201ENSMUST00000175245 249 ntBASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Gm27866-201ENSMUST00000184459 171 ntBASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Gm37355-201ENSMUST00000193345 606 ntBASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Gm8182-201ENSMUST00000197863 769 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms