Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm24576-201ENSMUST00000175508 248 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm29355-201ENSMUST00000188178 697 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm28953-201ENSMUST00000188336 697 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm20788-201ENSMUST00000190538 697 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm37395-201ENSMUST00000194721 697 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm42580-201ENSMUST00000197223 753 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm5027-201ENSMUST00000206700 375 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm5791-201ENSMUST00000220840 489 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 AC137950.1-201ENSMUST00000228553 515 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Olfr1255-201ENSMUST00000057369 933 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.86□□□□□ -1.31
Ccdc28bQ8CEG5 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Defa-ps7-201ENSMUST00000117139 168 ntBASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Gm14550-201ENSMUST00000117918 407 ntBASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Gm21430-201ENSMUST00000182998 998 ntBASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Mir8095-201ENSMUST00000185103 129 ntBASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Gm27458-201ENSMUST00000185108 121 ntBASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Gm8182-201ENSMUST00000197863 769 ntBASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 CT010472.1-201ENSMUST00000224000 704 ntBASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Gm5321-201ENSMUST00000072050 447 ntBASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Gm37067-201ENSMUST00000195730 1628 ntBASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.85□□□□□ -1.31
Ccdc28bQ8CEG5 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm10936-201ENSMUST00000105264 252 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm23031-201ENSMUST00000157998 119 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Gm23117-201ENSMUST00000158482 108 ntBASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc28bQ8CEG5 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 111.9 ms