Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gm3121-201ENSMUST00000187086 406 ntBASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gm44356-201ENSMUST00000196731 111 ntBASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gm42824-201ENSMUST00000199361 247 ntBASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gm18226-201ENSMUST00000215261 521 ntBASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 CT010472.1-201ENSMUST00000224000 704 ntBASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 AC134869.2-201ENSMUST00000225788 421 ntBASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 AC165154.2-201ENSMUST00000227310 336 ntBASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 AC080021.1-201ENSMUST00000228104 700 ntBASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gm9800-201ENSMUST00000052615 336 ntBASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gm5250-201ENSMUST00000059065 321 ntBASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Ccdc87Q8CDL9 Gm37283-201ENSMUST00000193111 1571 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm23701-201ENSMUST00000103893 110 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm11517-201ENSMUST00000119491 387 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm15842-201ENSMUST00000120513 618 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm24923-201ENSMUST00000178201 88 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Ighv5-5-201ENSMUST00000193826 329 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm37017-201ENSMUST00000195266 747 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm43558-201ENSMUST00000200155 210 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm19169-201ENSMUST00000220109 1246 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 AC139941.1-201ENSMUST00000221517 478 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 AC159205.2-201ENSMUST00000223759 816 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 CT009711.4-201ENSMUST00000225685 198 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 AC152940.1-201ENSMUST00000226504 139 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 AC138604.2-201ENSMUST00000226620 921 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm44186-201ENSMUST00000204118 2752 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7.54□□□□□ -1.2
Ccdc87Q8CDL9 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.53□□□□□ -1.2
Ccdc87Q8CDL9 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ccdc87Q8CDL9 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc87Q8CDL9 Gm7562-201ENSMUST00000210502 2537 ntBASIC7.53□□□□□ -1.2
Ccdc87Q8CDL9 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Ccdc87Q8CDL9 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Ccdc87Q8CDL9 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc87Q8CDL9 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Ccdc87Q8CDL9 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc87Q8CDL9 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc87Q8CDL9 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
Ccdc87Q8CDL9 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc87Q8CDL9 Gm15715-201ENSMUST00000118032 283 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms