Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Gm8357-201ENSMUST00000181115 1011 ntBASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Gm29008-201ENSMUST00000189387 298 ntBASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Gm38022-201ENSMUST00000191762 403 ntBASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Gm43664-201ENSMUST00000196038 734 ntBASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Gm26413-201ENSMUST00000196783 126 ntBASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Gm42464-202ENSMUST00000198111 774 ntBASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Gm36758-201ENSMUST00000222594 310 ntBASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Gm5250-201ENSMUST00000059065 321 ntBASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Gm15500-201ENSMUST00000071523 894 ntBASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
Lrif1Q8CDD9 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Mir678-201ENSMUST00000102114 84 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm13400-201ENSMUST00000117436 380 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm13463-201ENSMUST00000119020 233 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm12459-201ENSMUST00000120659 356 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm14212-201ENSMUST00000122023 826 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm28195-201ENSMUST00000186992 372 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm36932-201ENSMUST00000195226 929 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm44356-201ENSMUST00000196731 111 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm42804-201ENSMUST00000199701 178 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm4605-201ENSMUST00000203148 625 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm43905-201ENSMUST00000204516 204 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 AC122305.2-201ENSMUST00000215148 834 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
Lrif1Q8CDD9 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 Gm7562-201ENSMUST00000210502 2537 ntBASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 Gm25276-201ENSMUST00000104300 124 ntBASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Lrif1Q8CDD9 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms