Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Gm14896-201ENSMUST00000121311 1351 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Gm38244-201ENSMUST00000191737 2586 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 Prkaa1-202ENSMUST00000228218 4618 ntBASIC9.62□□□□□ -0.87
Usp40Q8BWR4 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Gm44286-201ENSMUST00000204098 1487 ntBASIC9.61□□□□□ -0.87
Usp40Q8BWR4 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Gm12540-201ENSMUST00000121938 319 ntBASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Gm14747-201ENSMUST00000149888 984 ntBASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Gm23968-201ENSMUST00000175047 125 ntBASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Gm18660-201ENSMUST00000199542 629 ntBASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Gm46231-201ENSMUST00000220152 314 ntBASIC9.61□□□□□ -0.87
Usp40Q8BWR4 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 AC122533.1-201ENSMUST00000225177 767 ntBASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Gm25131-201ENSMUST00000082653 151 ntBASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Gm37595-201ENSMUST00000192668 1742 ntBASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp40Q8BWR4 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Gm11581-201ENSMUST00000122024 763 ntBASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Gm35323-201ENSMUST00000191836 499 ntBASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Gm37191-201ENSMUST00000193346 388 ntBASIC9.6□□□□□ -0.87
Usp40Q8BWR4 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 AC156790.1-201ENSMUST00000226572 559 ntBASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Gm11853-201ENSMUST00000119687 1384 ntBASIC9.6□□□□□ -0.87
Usp40Q8BWR4 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC9.6□□□□□ -0.87
Usp40Q8BWR4 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Gm37321-201ENSMUST00000195742 1872 ntBASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Gm15596-201ENSMUST00000121139 784 ntBASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Gm9167-201ENSMUST00000182469 962 ntBASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Gm28846-201ENSMUST00000189161 368 ntBASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Gm8190-201ENSMUST00000199603 586 ntBASIC9.59□□□□□ -0.87
Usp40Q8BWR4 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 AC154834.1-201ENSMUST00000224697 358 ntBASIC9.59□□□□□ -0.87
Usp40Q8BWR4 AC138329.1-201ENSMUST00000225040 471 ntBASIC9.59□□□□□ -0.87
Usp40Q8BWR4 AC133203.1-201ENSMUST00000228241 301 ntBASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms