Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm13058-201ENSMUST00000117097 1435 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 1700034I23Rik-201ENSMUST00000099123 2348 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm8688-201ENSMUST00000118240 969 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm6275-201ENSMUST00000118971 1122 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm9141-201ENSMUST00000159355 1007 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 U2af1l4-205ENSMUST00000163482 668 ntTSL 5 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm28149-201ENSMUST00000187102 378 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm28768-201ENSMUST00000189034 378 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm37241-201ENSMUST00000191736 523 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm19231-201ENSMUST00000193212 830 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm42667-201ENSMUST00000196132 234 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Zfp474-202ENSMUST00000209270 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm9604-201ENSMUST00000211175 433 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 AC154307.1-201ENSMUST00000214799 90 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm8512-201ENSMUST00000215367 471 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 AC104906.1-201ENSMUST00000218122 913 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm7239-201ENSMUST00000220981 860 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gcnt2-204ENSMUST00000223570 335 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Nsa2-203ENSMUST00000225410 974 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Diaph3-204ENSMUST00000226254 682 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 AC167019.4-201ENSMUST00000226494 1070 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm14267-208ENSMUST00000228324 1189 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm22748-201ENSMUST00000082493 136 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Ocm-202ENSMUST00000085704 330 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Olfr1286-201ENSMUST00000099617 918 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 AC105407.2-205ENSMUST00000224680 2733 ntBASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 4933402N03Rik-201ENSMUST00000070980 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Prpf38bQ80SY5 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC8.21□□□□□ -1.09
Prpf38bQ80SY5 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC8.21□□□□□ -1.09
Prpf38bQ80SY5 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Prpf38bQ80SY5 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Prpf38bQ80SY5 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Prpf38bQ80SY5 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Prpf38bQ80SY5 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Prpf38bQ80SY5 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Prpf38bQ80SY5 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Prpf38bQ80SY5 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Prpf38bQ80SY5 AC122878.1-201ENSMUST00000227716 1460 ntBASIC8.21□□□□□ -1.09
Prpf38bQ80SY5 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Prpf38bQ80SY5 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Prpf38bQ80SY5 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Prpf38bQ80SY5 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC8.21□□□□□ -1.09
Prpf38bQ80SY5 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Prpf38bQ80SY5 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Prpf38bQ80SY5 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Prpf38bQ80SY5 Gm24462-201ENSMUST00000102430 106 ntBASIC8.21□□□□□ -1.1
Prpf38bQ80SY5 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Prpf38bQ80SY5 Gm24869-201ENSMUST00000104072 128 ntBASIC8.21□□□□□ -1.1
Prpf38bQ80SY5 Gm25631-201ENSMUST00000104390 130 ntBASIC8.21□□□□□ -1.1
Prpf38bQ80SY5 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Prpf38bQ80SY5 Gm13735-201ENSMUST00000120217 670 ntBASIC8.21□□□□□ -1.1
Prpf38bQ80SY5 Gm13221-201ENSMUST00000121712 430 ntBASIC8.21□□□□□ -1.1
Prpf38bQ80SY5 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Prpf38bQ80SY5 Gm12354-201ENSMUST00000124319 554 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms