Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 n-R5s172-201ENSMUST00000104508 114 ntBASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Gm5319-201ENSMUST00000118965 873 ntBASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Gm14869-201ENSMUST00000119007 884 ntBASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Gm13900-201ENSMUST00000119402 498 ntBASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Gm25180-201ENSMUST00000157746 115 ntBASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Gm4956-202ENSMUST00000178869 672 ntBASIC7.76□□□□□ -1.17
Usp49Q6P9L4 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Gm2221-201ENSMUST00000209342 418 ntBASIC7.76□□□□□ -1.17
Usp49Q6P9L4 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Gm18655-201ENSMUST00000214802 1090 ntBASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 AC122539.1-201ENSMUST00000219925 329 ntBASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Gm7986-201ENSMUST00000221336 551 ntBASIC7.76□□□□□ -1.17
Usp49Q6P9L4 AC159188.3-201ENSMUST00000224199 880 ntBASIC7.76□□□□□ -1.17
Usp49Q6P9L4 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC7.76□□□□□ -1.17
Usp49Q6P9L4 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Gm37534-201ENSMUST00000194483 5222 ntBASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp49Q6P9L4 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm25379-201ENSMUST00000104338 114 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm13221-201ENSMUST00000121712 430 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Mir1929-201ENSMUST00000158635 93 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm26455-201ENSMUST00000175300 92 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm29357-201ENSMUST00000186877 698 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm29240-201ENSMUST00000187248 286 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm25189-201ENSMUST00000083911 164 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Mir455-201ENSMUST00000093594 82 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.75□□□□□ -1.17
Usp49Q6P9L4 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms