Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
ClpbQ60649 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
ClpbQ60649 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
ClpbQ60649 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 Gm15105-201ENSMUST00000117777 204 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 Gm14787-201ENSMUST00000121236 388 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC6.78□□□□□ -1.32
ClpbQ60649 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC6.78□□□□□ -1.32
ClpbQ60649 Gm23077-201ENSMUST00000157854 116 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 Ighv1-21-201ENSMUST00000194856 351 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 Gm43147-201ENSMUST00000196944 542 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC6.78□□□□□ -1.32
ClpbQ60649 Gm5154-201ENSMUST00000203971 399 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC6.78□□□□□ -1.32
ClpbQ60649 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC6.78□□□□□ -1.32
ClpbQ60649 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.78□□□□□ -1.32
ClpbQ60649 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.78□□□□□ -1.32
ClpbQ60649 AC158142.3-201ENSMUST00000226230 675 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 AC138604.2-201ENSMUST00000226620 921 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
ClpbQ60649 n-R5s29-201ENSMUST00000082836 119 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
ClpbQ60649 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC6.78□□□□□ -1.32
ClpbQ60649 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
ClpbQ60649 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.78□□□□□ -1.32
ClpbQ60649 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
ClpbQ60649 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ClpbQ60649 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC6.78□□□□□ -1.32
ClpbQ60649 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
ClpbQ60649 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.77□□□□□ -1.32
ClpbQ60649 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
ClpbQ60649 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.77□□□□□ -1.32
ClpbQ60649 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.77□□□□□ -1.32
ClpbQ60649 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ClpbQ60649 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ClpbQ60649 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
ClpbQ60649 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.77□□□□□ -1.33
ClpbQ60649 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ClpbQ60649 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ClpbQ60649 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ClpbQ60649 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ClpbQ60649 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
ClpbQ60649 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
ClpbQ60649 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
ClpbQ60649 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
ClpbQ60649 Gm15739-201ENSMUST00000118049 872 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Gm15186-201ENSMUST00000119345 563 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Gm13486-201ENSMUST00000119910 282 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Gm15842-201ENSMUST00000120513 618 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ClpbQ60649 Gm10913-201ENSMUST00000133732 463 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Gm2735-201ENSMUST00000136133 277 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ClpbQ60649 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
ClpbQ60649 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ClpbQ60649 Gm23164-201ENSMUST00000175084 111 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ClpbQ60649 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ClpbQ60649 Gm5272-201ENSMUST00000182730 982 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Gm5787-201ENSMUST00000183049 1038 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Gm27684-201ENSMUST00000183778 80 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC6.77□□□□□ -1.33
ClpbQ60649 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC6.77□□□□□ -1.33
ClpbQ60649 Gm29214-201ENSMUST00000190216 570 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.77□□□□□ -1.33
ClpbQ60649 Gm19175-201ENSMUST00000199895 916 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ClpbQ60649 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
ClpbQ60649 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
ClpbQ60649 Mir484-201ENSMUST00000093566 67 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
ClpbQ60649 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
ClpbQ60649 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.77□□□□□ -1.33
ClpbQ60649 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ClpbQ60649 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ClpbQ60649 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ClpbQ60649 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Gm26575-201ENSMUST00000181714 2232 ntBASIC6.77□□□□□ -1.33
ClpbQ60649 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
ClpbQ60649 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
ClpbQ60649 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms