Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm15109-201ENSMUST00000133085 2026 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm37373-201ENSMUST00000194005 2812 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm30698-201ENSMUST00000214789 3198 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm11581-201ENSMUST00000122024 763 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm23891-201ENSMUST00000158114 138 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm18752-201ENSMUST00000192876 608 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm37883-201ENSMUST00000194970 725 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm19047-201ENSMUST00000220922 1099 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 AC150661.1-201ENSMUST00000222563 495 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 AC163660.1-201ENSMUST00000223696 818 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 AC151730.1-201ENSMUST00000226106 448 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm26130-201ENSMUST00000083171 138 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Mir296-201ENSMUST00000083587 79 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm43789-201ENSMUST00000199275 2472 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm43488-201ENSMUST00000198874 2504 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Gm42653-201ENSMUST00000200644 2839 ntBASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Vps54Q5SPW0 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm15349-201ENSMUST00000121154 204 ntBASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm23276-201ENSMUST00000157913 138 ntBASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm17217-201ENSMUST00000166613 469 ntBASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm19480-201ENSMUST00000185547 667 ntBASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm4856-201ENSMUST00000192696 1091 ntBASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm4860-201ENSMUST00000200368 454 ntBASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm17822-201ENSMUST00000204307 351 ntBASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm44892-201ENSMUST00000208595 488 ntBASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 AC153936.1-201ENSMUST00000219874 395 ntBASIC8.29□□□□□ -1.08
Vps54Q5SPW0 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Vps54Q5SPW0 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Vps54Q5SPW0 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms