Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC8.38□□□□□ -1.07
Gm28047Q3US59 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm28047Q3US59 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm28047Q3US59 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Gm28047Q3US59 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm28047Q3US59 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm28047Q3US59 Gm10623-201ENSMUST00000209081 2639 ntBASIC8.38□□□□□ -1.07
Gm28047Q3US59 Gm37924-201ENSMUST00000195470 3647 ntBASIC8.38□□□□□ -1.07
Gm28047Q3US59 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Gm28047Q3US59 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.38□□□□□ -1.07
Gm28047Q3US59 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm28047Q3US59 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Gm28047Q3US59 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm43178-201ENSMUST00000197257 1386 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm43168-201ENSMUST00000201039 1612 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm22660-201ENSMUST00000104193 130 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm11245-201ENSMUST00000119419 1037 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm22818-201ENSMUST00000157446 104 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm8046-201ENSMUST00000172151 616 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm18416-201ENSMUST00000175635 1003 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm24925-201ENSMUST00000178157 107 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm27458-201ENSMUST00000185108 121 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm29064-201ENSMUST00000187014 813 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm37987-201ENSMUST00000194999 825 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm7492-201ENSMUST00000201745 725 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 AC123835.1-201ENSMUST00000214362 670 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 AC102689.1-201ENSMUST00000220511 1090 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 CT009550.5-201ENSMUST00000226286 382 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 AC121997.2-202ENSMUST00000227158 939 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 AC132833.3-201ENSMUST00000227472 866 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Olfr815-201ENSMUST00000071557 951 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm6807-201ENSMUST00000077435 888 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm10388-201ENSMUST00000205001 2936 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm18359-201ENSMUST00000173024 1459 ntBASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Gm28047Q3US59 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.37□□□□□ -1.07
Gm28047Q3US59 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Gm28047Q3US59 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Gm28047Q3US59 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Gm28047Q3US59 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Gm28047Q3US59 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Gm28047Q3US59 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Gm28047Q3US59 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Gm28047Q3US59 Gm26645-201ENSMUST00000181076 1316 ntBASIC8.36□□□□□ -1.07
Gm28047Q3US59 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Gm28047Q3US59 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Gm28047Q3US59 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Gm28047Q3US59 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Gm28047Q3US59 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Gm28047Q3US59 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Gm28047Q3US59 Mir763-201ENSMUST00000103249 120 ntBASIC8.36□□□□□ -1.07
Gm28047Q3US59 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Gm28047Q3US59 Gm16149-201ENSMUST00000117631 309 ntBASIC8.36□□□□□ -1.07
Gm28047Q3US59 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.36□□□□□ -1.07
Gm28047Q3US59 Gm11810-201ENSMUST00000118311 333 ntBASIC8.36□□□□□ -1.07
Gm28047Q3US59 Gm12387-201ENSMUST00000118573 955 ntBASIC8.36□□□□□ -1.07
Gm28047Q3US59 Gm12757-201ENSMUST00000119465 800 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 133.9 ms