Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm43331-201ENSMUST00000197991 1689 ntBASIC8.97□□□□□ -0.97
Smarcc1P97496 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc1P97496 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Smarcc1P97496 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc1P97496 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC8.97□□□□□ -0.97
Smarcc1P97496 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Smarcc1P97496 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Smarcc1P97496 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc1P97496 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc1P97496 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Smarcc1P97496 AC107763.1-202ENSMUST00000225021 2663 ntBASIC8.97□□□□□ -0.97
Smarcc1P97496 Gm26340-201ENSMUST00000102365 99 ntBASIC8.97□□□□□ -0.97
Smarcc1P97496 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc1P97496 Gm15242-201ENSMUST00000122459 283 ntBASIC8.97□□□□□ -0.97
Smarcc1P97496 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC8.97□□□□□ -0.97
Smarcc1P97496 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC8.97□□□□□ -0.97
Smarcc1P97496 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Smarcc1P97496 Gm22990-201ENSMUST00000175427 89 ntBASIC8.97□□□□□ -0.97
Smarcc1P97496 Gm38254-201ENSMUST00000192276 1009 ntBASIC8.97□□□□□ -0.97
Smarcc1P97496 Gm19088-201ENSMUST00000198800 566 ntBASIC8.97□□□□□ -0.97
Smarcc1P97496 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc1P97496 Gm45071-201ENSMUST00000205353 571 ntBASIC8.97□□□□□ -0.97
Smarcc1P97496 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Smarcc1P97496 Gm9240-201ENSMUST00000206527 742 ntBASIC8.97□□□□□ -0.97
Smarcc1P97496 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
Smarcc1P97496 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC8.97□□□□□ -0.97
Smarcc1P97496 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC8.97□□□□□ -0.97
Smarcc1P97496 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC8.97□□□□□ -0.97
Smarcc1P97496 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC8.97□□□□□ -0.97
Smarcc1P97496 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC8.97□□□□□ -0.97
Smarcc1P97496 AC154324.1-201ENSMUST00000226711 814 ntBASIC8.97□□□□□ -0.97
Smarcc1P97496 AC125405.2-201ENSMUST00000227862 383 ntBASIC8.97□□□□□ -0.97
Smarcc1P97496 Mir425-201ENSMUST00000083645 85 ntBASIC8.97□□□□□ -0.97
Smarcc1P97496 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
Smarcc1P97496 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
Smarcc1P97496 AC124680.1-201ENSMUST00000223923 1585 ntBASIC8.97□□□□□ -0.97
Smarcc1P97496 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Smarcc1P97496 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Smarcc1P97496 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc1P97496 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc1P97496 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc1P97496 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc1P97496 Gm38331-201ENSMUST00000195719 2671 ntBASIC8.97□□□□□ -0.97
Smarcc1P97496 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Smarcc1P97496 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smarcc1P97496 AC105958.1-201ENSMUST00000214783 2144 ntBASIC8.96□□□□□ -0.97
Smarcc1P97496 AC158986.1-201ENSMUST00000228391 3455 ntBASIC8.96□□□□□ -0.97
Smarcc1P97496 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Smarcc1P97496 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smarcc1P97496 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Smarcc1P97496 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC8.96□□□□□ -0.97
Smarcc1P97496 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smarcc1P97496 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm22267-201ENSMUST00000104008 131 ntBASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm23979-201ENSMUST00000104071 128 ntBASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm25785-201ENSMUST00000104129 125 ntBASIC8.96□□□□□ -0.98
Smarcc1P97496 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smarcc1P97496 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC8.96□□□□□ -0.98
Smarcc1P97496 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm14070-201ENSMUST00000120773 428 ntBASIC8.96□□□□□ -0.98
Smarcc1P97496 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smarcc1P97496 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm16027-201ENSMUST00000161618 758 ntBASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm20454-201ENSMUST00000172713 221 ntBASIC8.96□□□□□ -0.98
Smarcc1P97496 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm29385-201ENSMUST00000186831 363 ntBASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm28438-201ENSMUST00000188299 345 ntBASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm28952-201ENSMUST00000189285 681 ntBASIC8.96□□□□□ -0.98
Smarcc1P97496 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
Smarcc1P97496 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm17895-201ENSMUST00000194028 874 ntBASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm37637-201ENSMUST00000195540 1256 ntBASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC8.96□□□□□ -0.98
Smarcc1P97496 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm18012-201ENSMUST00000204558 773 ntBASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.96□□□□□ -0.98
Smarcc1P97496 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Smarcc1P97496 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC8.96□□□□□ -0.98
Smarcc1P97496 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm37499-201ENSMUST00000194683 3478 ntBASIC8.96□□□□□ -0.98
Smarcc1P97496 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smarcc1P97496 CT573019.1-201ENSMUST00000227762 1689 ntBASIC8.96□□□□□ -0.98
Smarcc1P97496 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smarcc1P97496 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smarcc1P97496 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smarcc1P97496 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Smarcc1P97496 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smarcc1P97496 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smarcc1P97496 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smarcc1P97496 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Smarcc1P97496 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Smarcc1P97496 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Smarcc1P97496 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Smarcc1P97496 Gm8995-202ENSMUST00000208417 3490 ntBASIC8.95□□□□□ -0.98
Smarcc1P97496 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.95□□□□□ -0.98
Smarcc1P97496 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
Smarcc1P97496 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Smarcc1P97496 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms