Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm45122-201ENSMUST00000206376 784 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC4.58□□□□□ -1.68
PrkdcP97313 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 AV026068-220ENSMUST00000224153 1147 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 AV026068-224ENSMUST00000224827 928 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Gm9800-201ENSMUST00000052615 336 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Gm24924-201ENSMUST00000084007 164 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
PrkdcP97313 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Gm27820-201ENSMUST00000183628 175 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Gm28266-201ENSMUST00000191410 439 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Gm37196-201ENSMUST00000194762 906 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Gm2089-201ENSMUST00000218294 479 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm37786-201ENSMUST00000191714 3225 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm14615-201ENSMUST00000117575 1816 ntBASIC4.58□□□□□ -1.68
PrkdcP97313 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PrkdcP97313 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
PrkdcP97313 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
PrkdcP97313 Gm12710-201ENSMUST00000119011 216 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC4.57□□□□□ -1.68
PrkdcP97313 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PrkdcP97313 Gm28943-201ENSMUST00000186187 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm28736-201ENSMUST00000186257 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm29401-201ENSMUST00000186690 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm29178-204ENSMUST00000186784 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm28589-201ENSMUST00000186991 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm28936-201ENSMUST00000187153 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm29121-201ENSMUST00000187611 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm28243-201ENSMUST00000187801 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm28844-202ENSMUST00000187977 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm28061-201ENSMUST00000189085 807 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm18969-201ENSMUST00000189423 730 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm29058-201ENSMUST00000189510 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm29624-201ENSMUST00000190018 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm28780-201ENSMUST00000190223 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm28969-211ENSMUST00000190992 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm28990-207ENSMUST00000191219 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm36468-201ENSMUST00000192119 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm31572-201ENSMUST00000193341 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm30175-201ENSMUST00000194173 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm30858-201ENSMUST00000195516 615 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC4.57□□□□□ -1.68
PrkdcP97313 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Gm36933-201ENSMUST00000194945 3071 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
PrkdcP97313 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC4.57□□□□□ -1.68
PrkdcP97313 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Gm29438-201ENSMUST00000191298 2613 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC4.57□□□□□ -1.68
PrkdcP97313 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Gm2011-203ENSMUST00000203750 435 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC4.57□□□□□ -1.68
PrkdcP97313 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
PrkdcP97313 AC151971.3-201ENSMUST00000214694 404 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 AC166358.5-201ENSMUST00000220706 1302 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PrkdcP97313 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 CT025645.1-201ENSMUST00000222760 4322 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Egflam-202ENSMUST00000096494 4391 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Gm42763-201ENSMUST00000199595 2087 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Gm43430-201ENSMUST00000196513 3897 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PrkdcP97313 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms