Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ufd1P70362 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC5.89□□□□□ -1.47
Ufd1P70362 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ufd1P70362 Gm22552-201ENSMUST00000157796 337 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.89□□□□□ -1.47
Ufd1P70362 Gm21181-201ENSMUST00000186249 330 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Gm38203-201ENSMUST00000191815 245 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC5.89□□□□□ -1.47
Ufd1P70362 Gm37339-201ENSMUST00000194142 392 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ufd1P70362 Gm43310-201ENSMUST00000198975 820 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Gm44306-201ENSMUST00000203058 203 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Gm8921-201ENSMUST00000204306 649 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Gm20274-201ENSMUST00000206967 584 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Gm45475-201ENSMUST00000209381 309 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Gm2767-201ENSMUST00000209582 473 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC5.89□□□□□ -1.47
Ufd1P70362 AC165349.2-201ENSMUST00000219097 426 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC5.89□□□□□ -1.47
Ufd1P70362 AC238940.2-201ENSMUST00000224202 330 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 AC154324.1-201ENSMUST00000226711 814 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ufd1P70362 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ufd1P70362 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ufd1P70362 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ufd1P70362 Gm24143-201ENSMUST00000082633 145 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Gm24405-201ENSMUST00000083033 167 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Mir135b-201ENSMUST00000083501 97 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.89□□□□□ -1.47
Ufd1P70362 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ufd1P70362 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ufd1P70362 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ufd1P70362 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC5.89□□□□□ -1.47
Ufd1P70362 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ufd1P70362 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ufd1P70362 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ufd1P70362 Gm14615-201ENSMUST00000117575 1816 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ufd1P70362 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ufd1P70362 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Ufd1P70362 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC5.88□□□□□ -1.47
Ufd1P70362 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Ufd1P70362 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ufd1P70362 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ufd1P70362 AC156636.2-201ENSMUST00000218845 4557 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ufd1P70362 Gm23192-201ENSMUST00000102434 96 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ufd1P70362 Gm11809-201ENSMUST00000120923 950 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Gm13221-201ENSMUST00000121712 430 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ufd1P70362 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC5.88□□□□□ -1.47
Ufd1P70362 Wdr61-205ENSMUST00000130368 1162 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ufd1P70362 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC5.88□□□□□ -1.47
Ufd1P70362 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ufd1P70362 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ufd1P70362 Gm26323-201ENSMUST00000157743 175 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ufd1P70362 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC5.88□□□□□ -1.47
Ufd1P70362 Gm5205-201ENSMUST00000182253 1003 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Gm9274-201ENSMUST00000182505 984 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Gm8502-201ENSMUST00000185708 901 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Gm21147-201ENSMUST00000186046 913 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ufd1P70362 Gm28145-201ENSMUST00000189742 380 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Gm42580-201ENSMUST00000197223 753 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Gm9689-201ENSMUST00000210009 428 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 AC119987.1-201ENSMUST00000212316 848 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Gm36758-201ENSMUST00000222594 310 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 AC160109.1-201ENSMUST00000225592 729 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 AC134869.2-201ENSMUST00000225788 421 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 AC137117.3-201ENSMUST00000226265 485 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ufd1P70362 AC142114.1-201ENSMUST00000227724 328 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Wdr61-201ENSMUST00000051822 1187 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ufd1P70362 Olfr518-201ENSMUST00000059617 1002 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ufd1P70362 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ufd1P70362 Gm7808-201ENSMUST00000082002 387 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ufd1P70362 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ufd1P70362 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Gm42595-201ENSMUST00000196771 1607 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC5.88□□□□□ -1.47
Ufd1P70362 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.88□□□□□ -1.47
Ufd1P70362 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.87□□□□□ -1.47
Ufd1P70362 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ufd1P70362 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ufd1P70362 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ufd1P70362 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ufd1P70362 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ufd1P70362 Rpl22-201ENSMUST00000103191 474 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ufd1P70362 Gm22900-201ENSMUST00000104538 130 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms