Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC8.09□□□□□ -1.11
Hmgb1P63158 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC8.09□□□□□ -1.11
Hmgb1P63158 Gm44356-201ENSMUST00000196731 111 ntBASIC8.09□□□□□ -1.11
Hmgb1P63158 Gm5853-201ENSMUST00000197183 632 ntBASIC8.09□□□□□ -1.11
Hmgb1P63158 Gm20223-201ENSMUST00000199932 805 ntBASIC8.09□□□□□ -1.11
Hmgb1P63158 Gm34583-203ENSMUST00000202586 454 ntBASIC8.09□□□□□ -1.11
Hmgb1P63158 AC151971.2-201ENSMUST00000217540 909 ntBASIC8.09□□□□□ -1.11
Hmgb1P63158 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC8.09□□□□□ -1.11
Hmgb1P63158 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC8.09□□□□□ -1.11
Hmgb1P63158 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC8.09□□□□□ -1.11
Hmgb1P63158 AC238940.2-201ENSMUST00000224202 330 ntBASIC8.09□□□□□ -1.11
Hmgb1P63158 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Hmgb1P63158 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Hmgb1P63158 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Hmgb1P63158 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Hmgb1P63158 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Hmgb1P63158 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Hmgb1P63158 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Hmgb1P63158 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC8.09□□□□□ -1.11
Hmgb1P63158 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.09□□□□□ -1.11
Hmgb1P63158 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Hmgb1P63158 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Hmgb1P63158 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Hmgb1P63158 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.09□□□□□ -1.11
Hmgb1P63158 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Hmgb1P63158 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Hmgb1P63158 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Hmgb1P63158 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Hmgb1P63158 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Hmgb1P63158 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
Hmgb1P63158 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.09□□□□□ -1.12
Hmgb1P63158 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Hmgb1P63158 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Hmgb1P63158 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 AC159002.2-201ENSMUST00000228843 4874 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Hmgb1P63158 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Hmgb1P63158 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Hmgb1P63158 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC8.08□□□□□ -1.12
Hmgb1P63158 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Hmgb1P63158 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm12026-201ENSMUST00000120961 1024 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm11258-201ENSMUST00000121086 1218 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC8.08□□□□□ -1.12
Hmgb1P63158 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC8.08□□□□□ -1.12
Hmgb1P63158 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm22795-201ENSMUST00000157233 118 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm22562-201ENSMUST00000157334 111 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm23069-201ENSMUST00000158240 311 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm2951-201ENSMUST00000169447 490 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm22852-201ENSMUST00000177899 101 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm6236-201ENSMUST00000193785 1009 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm2622-201ENSMUST00000200018 471 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC8.08□□□□□ -1.12
Hmgb1P63158 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC8.08□□□□□ -1.12
Hmgb1P63158 AC156576.2-202ENSMUST00000222525 411 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 CT030662.3-201ENSMUST00000228751 476 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Hmgb1P63158 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC8.08□□□□□ -1.12
Hmgb1P63158 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Hmgb1P63158 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.08□□□□□ -1.12
Hmgb1P63158 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Gm18726-201ENSMUST00000218175 2010 ntBASIC8.08□□□□□ -1.12
Hmgb1P63158 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hmgb1P63158 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hmgb1P63158 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Hmgb1P63158 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Hmgb1P63158 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
Hmgb1P63158 Gm42645-201ENSMUST00000201573 1627 ntBASIC8.07□□□□□ -1.12
Hmgb1P63158 AC151904.1-201ENSMUST00000219945 1498 ntBASIC8.07□□□□□ -1.12
Hmgb1P63158 Gm14886-201ENSMUST00000117208 2629 ntBASIC8.07□□□□□ -1.12
Hmgb1P63158 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Hmgb1P63158 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
Hmgb1P63158 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms