Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Mir3078-201ENSMUST00000175231 87 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm23413-201ENSMUST00000175521 125 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm7481-201ENSMUST00000182020 995 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm28871-201ENSMUST00000186191 687 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm29362-201ENSMUST00000187898 133 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm28193-201ENSMUST00000189863 615 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm29517-201ENSMUST00000190744 351 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm43555-201ENSMUST00000196588 310 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm42720-201ENSMUST00000196813 300 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm43308-201ENSMUST00000197236 373 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm43471-201ENSMUST00000197550 467 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm19254-201ENSMUST00000204828 294 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC6.82□□□□□ -1.32
Sf3b6P59708 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.82□□□□□ -1.32
Sf3b6P59708 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Sf3b6P59708 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm8290-201ENSMUST00000218202 477 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm8137-201ENSMUST00000218997 463 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm46379-201ENSMUST00000222551 265 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC6.82□□□□□ -1.32
Sf3b6P59708 CT033778.1-201ENSMUST00000224767 767 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 Plac8-201ENSMUST00000031264 744 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sf3b6P59708 Hist1h1t-201ENSMUST00000041052 912 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Sf3b6P59708 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Sf3b6P59708 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sf3b6P59708 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sf3b6P59708 Klk1b11-201ENSMUST00000007156 863 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sf3b6P59708 Olfr5-201ENSMUST00000086318 1044 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Sf3b6P59708 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sf3b6P59708 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sf3b6P59708 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sf3b6P59708 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm13058-201ENSMUST00000117097 1435 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sf3b6P59708 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sf3b6P59708 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sf3b6P59708 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Sf3b6P59708 Gm7842-201ENSMUST00000217691 1379 ntBASIC6.82□□□□□ -1.32
Sf3b6P59708 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sf3b6P59708 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm45407-201ENSMUST00000209499 3676 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sf3b6P59708 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm1982-201ENSMUST00000188615 1887 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Sf3b6P59708 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Sf3b6P59708 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sf3b6P59708 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sf3b6P59708 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm23192-201ENSMUST00000102434 96 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
Sf3b6P59708 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
Sf3b6P59708 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC6.81□□□□□ -1.32
Sf3b6P59708 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm14450-201ENSMUST00000119984 240 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm11765-201ENSMUST00000121173 1205 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm8865-201ENSMUST00000125697 430 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sf3b6P59708 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sf3b6P59708 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sf3b6P59708 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm23497-201ENSMUST00000157738 130 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm23385-201ENSMUST00000158592 295 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm24824-201ENSMUST00000175097 78 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.81□□□□□ -1.32
Sf3b6P59708 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm28113-201ENSMUST00000188280 229 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm7200-201ENSMUST00000188426 1163 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC6.81□□□□□ -1.32
Sf3b6P59708 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm37108-201ENSMUST00000194605 626 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Ighv10-2-201ENSMUST00000195182 298 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm7631-201ENSMUST00000196935 1100 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sf3b6P59708 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm18861-201ENSMUST00000202509 1186 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm44003-201ENSMUST00000203024 490 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm18877-201ENSMUST00000207706 539 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm4548-201ENSMUST00000208487 509 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm5339-201ENSMUST00000210551 1102 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
Sf3b6P59708 Gm32842-201ENSMUST00000212653 738 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 AC115047.1-201ENSMUST00000213795 322 ntBASIC6.81□□□□□ -1.32
Sf3b6P59708 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms